NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9024.1 Public Homo sapiens 12 METTL25 24 110 108 CCDS HistoryNCBI Gene:84190Re-query CCDS DB by CCDS ID:9024.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9024.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248306.8 ENSP00000248306.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000248306.8Link to Ensembl Protein Viewer:ENSP00000248306.3Re-query CCDS DB by Nucleotide ID:ENST00000248306Re-query CCDS DB by Protein ID:ENSP00000248306
Original member Current member NCBI NM_032230.3 NP_115606.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032230.3Link to Protein Sequence:NP_115606.2Re-query CCDS DB by Nucleotide ID:NM_032230Re-query CCDS DB by Protein ID:NP_115606Link to BLAST:NP_115606.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115606.2 603 Q8N6Q8 603 100% 0 0

Chromosomal Locations for CCDS 9024.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 82358566 82358824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82386803 82386967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82389816 82389922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82398795 82399394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82402983 82403130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82430893 82430987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82434695 82434724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82438718 82438791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82456727 82456820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82476644 82476718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82477281 82477352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82478932 82479024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGGCGGCTTCTTGCCCTCTCCCGGTGACCCCGGACCTGCCCACGCTGCGTGCCAAGTTGCAGGGACTGC
TGCAGTTCCTGAGGGATGCCCTGTCCATTTCCAATGCACATACCGTGGATTTCTACACAGAATCCGTGTG
GGAGGAGCTGGTCGACTTGCCACCGGAGACAGTGCTGGCTGCGCTGAGGAAGTCAGCGTCGGAGACGGAG
GCCCTGCCCTCAGAGACGCGCCCCCTAGTGGAAGCAGAGTGGGAAGCAGGTATGACTGATTTTCCCAAAA
TATTTTGTGAAACTTCTCAGAAGTTGGTGAGTGTGGAAGCCTTTGCTCTGGCTGCGAAATACTATTCTGT
ACAAAACTTGGGAATATGTACTCCTTTTGAACAGTTGCTTGTAGCCCTTCGAGGAAATCAAAACCAGAGA
ATTGGTGAAAATCAGAAGGCAGTTGAGTTTATGAATATGAAGAAATCTCATGAAGTTCAGGCAATGTCAG
AGCTGATCAGCAGTATTGCTGACTACTATGGAATAAAGCAGGTGATTGACTTGGGTTCCGGTAAAGGCTA
CCTAAGCTCTTTTTTGTCCTTGAAGTATGGCTTAAAAGTTTATGGAATTGATTCTTCAAATACCAATACT
CATGGAGCTGAGGAGAGAAACAGAAAATTGAAGAAACATTGGAAACTCTGTCATGCTCAGTCAAGATTAG
ATGTCAATGGACTAGCATTAAAAATGGCAAAAGAAAGGAAAGTGCAAAATAAAGTTAAAAATAAAGCTGA
TACTGAGGAAGTGTTTAACAACAGTCCTACAAATCAAGAAAAGATGCCTACCTCAGCTATTTTGCCTGAT
TTTTCTGGCTCTGTAATTTCTAATATCAGAAACCAAATGGAAACCCTTCATTCTCAGCCACATCAAGAAG
AAAATTTGTGTTTTGAAAATTCCTTTTCTCTTATAAACCTTTTGCCTATTAATGCTGTAGAGCCTACTTC
TTCACAGCAAATACCCAACAGAGAAACATCTGAAGCCAATAAAGAGAGAAGAAAAATGACATCAAAGTCA
AGTGAATCAAATATATATTCACCTTTAACCTCTTTTATCACTGCTGATTCAGAACTCCATGACATTATTA
AAGATTTGGAGGATTGTTTGATGGTGGGTCTCCACACTTGTGGTGATCTGGCTCCAAATACTTTGCGAAT
ATTTACCTCCAACTCTGAAATCAAGGGAGTTTGCAGTGTGGGTTGTTGCTACCACCTCTTATCTGAAGAA
TTTGAAAACCAGCATAAAGAACGTACTCAGGAAAAGTGGGGATTTCCAATGTGCCACTATTTAAAGGAAG
AGAGATGGTGCTGTGGTCGTAATGCCAGAATGTCAGCATGTTTGGCATTGGAGCGGGTTGCAGCTGGCCA
AGGGCTGCCTACTGAATCACTCTTCTATCGTGCTGTTCTTCAGGATATTATTAAAGATTGTTATGGCATC
ACCAAATGTGATCGGCATGTTGGTAAAATTTATTCCAAATGTTCTTCTTTTCTGGATTATGTCAGACGGT
CTCTAAAGAAGCTTGGATTAGATGAGTCCAAGCTGCCAGAAAAAATTATAATGAACTACTACGAGAAGTA
TAAGCCTCGAATGAATGAGCTGGAAGCTTTTAATATGTTGAAAGTTGTACTGGCTCCCTGTATAGAGACT
TTGATTCTTCTGGATCGACTTTGTTACCTGAAAGAGCAGGAAGATATTGCATGGTCTGCTCTTGTGAAGT
TGTTTGATCCCGTGAAATCTCCCAGATGTTATGCTGTTATTGCCCTGAAGAAGCAGCAGTGA

Translation (603 aa):
MAASCPLPVTPDLPTLRAKLQGLLQFLRDALSISNAHTVDFYTESVWEELVDLPPETVLAALRKSASETE
ALPSETRPLVEAEWEAGMTDFPKIFCETSQKLVSVEAFALAAKYYSVQNLGICTPFEQLLVALRGNQNQR
IGENQKAVEFMNMKKSHEVQAMSELISSIADYYGIKQVIDLGSGKGYLSSFLSLKYGLKVYGIDSSNTNT
HGAEERNRKLKKHWKLCHAQSRLDVNGLALKMAKERKVQNKVKNKADTEEVFNNSPTNQEKMPTSAILPD
FSGSVISNIRNQMETLHSQPHQEENLCFENSFSLINLLPINAVEPTSSQQIPNRETSEANKERRKMTSKS
SESNIYSPLTSFITADSELHDIIKDLEDCLMVGLHTCGDLAPNTLRIFTSNSEIKGVCSVGCCYHLLSEE
FENQHKERTQEKWGFPMCHYLKEERWCCGRNARMSACLALERVAAGQGLPTESLFYRAVLQDIIKDCYGI
TKCDRHVGKIYSKCSSFLDYVRRSLKKLGLDESKLPEKIIMNYYEKYKPRMNELEAFNMLKVVLAPCIET
LILLDRLCYLKEQEDIAWSALVKLFDPVKSPRCYAVIALKKQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH