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Report for CCDS2135.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2135.1 Public Homo sapiens 2 NIFK 24 110 108 CCDS HistoryNCBI Gene:84365Re-query CCDS DB by CCDS ID:2135.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2135.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285814.9 ENSP00000285814.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285814.9Link to Ensembl Protein Viewer:ENSP00000285814.4Re-query CCDS DB by Nucleotide ID:ENST00000285814Re-query CCDS DB by Protein ID:ENSP00000285814
Original member Current member NCBI NM_032390.5 NP_115766.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032390.5Link to Protein Sequence:NP_115766.3Re-query CCDS DB by Nucleotide ID:NM_032390Re-query CCDS DB by Protein ID:NP_115766Link to BLAST:NP_115766.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115766.3 293 Q9BYG3 293 100% 0 0

Chromosomal Locations for CCDS 2135.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 121727724 121727912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121728288 121728356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121728477 121728536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121730893 121731104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121732096 121732204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121735613 121735750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121736746 121736850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGCGACTTTTTCTGGCCCGGCTGGGCCAATCCTGTCGCTTAATCCGCAGGAAGATGTCGAGTTTCAAA
AGGAGGTGGCGCAGGTTCGCAAGCGCATAACCCAGCGAAAAAAACAAGAACAACTTACTCCTGGAGTAGT
CTATGTGCGCCACCTACCTAACCTACTTGACGAAACCCAGATCTTTTCATATTTCTCCCAGTTTGGCACT
GTGACACGGTTCAGGCTGTCCAGAAGTAAAAGGACTGGAAATAGCAAAGGCTATGCATTTGTGGAGTTTG
AGTCTGAGGATGTTGCCAAAATAGTTGCTGAAACAATGAACAACTACCTGTTTGGTGAAAGACTCTTGGA
GTGTCATTTTATGCCACCTGAAAAAGTACATAAAGAACTCTTTAAAGACTGGAATATTCCATTTAAGCAG
CCATCATATCCATCAGTGAAACGGTATAATCGGAATCGGACACTAACACAAAAGCTACGGATGGAGGAGC
GATTTAAAAAGAAAGAAAGATTACTCAGGAAGAAATTAGCTAAAAAAGGAATTGACTATGATTTTCCTTC
TTTGATTTTACAGAAAACGGAAAGTATTTCAAAAACTAATCGTCAGACGTCTACAAAAGGCCAGGTTTTA
CGTAAGAAGAAGAAAAAAGTTTCAGGTACTCTTGACACTCCTGAGAAGACTGTGGATAGCCAGGGCCCCA
CACCAGTTTGTACACCAACATTTTTGGAGAGGCGAAAATCTCAAGTGGCTGAACTGAATGATGATGATAA
AGATGATGAAATAGTTTTCAAACAGCCCATATCCTGTGTAAAAGAAGAAATACAAGAGACTCAAACACCT
ACACATTCACGGAAAAAAAGACGAAGAAGCAGCAATCAGTGA

Translation (293 aa):
MATFSGPAGPILSLNPQEDVEFQKEVAQVRKRITQRKKQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGT
VTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFKQ
PSYPSVKRYNRNRTLTQKLRMEERFKKKERLLRKKLAKKGIDYDFPSLILQKTESISKTNRQTSTKGQVL
RKKKKKVSGTLDTPEKTVDSQGPTPVCTPTFLERRKSQVAELNDDDKDDEIVFKQPISCVKEEIQETQTP
THSRKKRRRSSNQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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