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Report for CCDS12984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12984.1 Public Homo sapiens 19 ZBTB45 24 110 108 CCDS HistoryNCBI Gene:84878Re-query CCDS DB by CCDS ID:12984.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12984.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354590.7 ENSP00000346603.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354590.7Link to Ensembl Protein Viewer:ENSP00000346603.2Re-query CCDS DB by Nucleotide ID:ENST00000354590Re-query CCDS DB by Protein ID:ENSP00000346603
Original member Current member EBI ENST00000594051.6 ENSP00000469089.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000594051.6Link to Ensembl Protein Viewer:ENSP00000469089.1Re-query CCDS DB by Nucleotide ID:ENST00000594051Re-query CCDS DB by Protein ID:ENSP00000469089
Original member Current member EBI ENST00000600990.1 ENSP00000473072.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600990.1Link to Ensembl Protein Viewer:ENSP00000473072.1Re-query CCDS DB by Nucleotide ID:ENST00000600990Re-query CCDS DB by Protein ID:ENSP00000473072
Original member Current member NCBI NM_001316978.2 NP_001303907.1 Accepted alive Link to Nucleotide Sequence:NM_001316978.2Link to Protein Sequence:NP_001303907.1Re-query CCDS DB by Nucleotide ID:NM_001316978Re-query CCDS DB by Protein ID:NP_001303907Link to BLAST:NP_001303907.1
Original member Current member NCBI NM_001316979.2 NP_001303908.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001316979.2Link to Protein Sequence:NP_001303908.1Re-query CCDS DB by Nucleotide ID:NM_001316979Re-query CCDS DB by Protein ID:NP_001303908Link to BLAST:NP_001303908.1
Original member NCBI NM_001316980.2 NP_001303909.1 Removed not alive Link to Nucleotide Sequence:NM_001316980.2Link to Protein Sequence:NP_001303909.1Re-query CCDS DB by Nucleotide ID:NM_001316980Re-query CCDS DB by Protein ID:NP_001303909Link to BLAST:NP_001303909.1
Original member Current member NCBI NM_001316981.2 NP_001303910.1 Accepted alive Link to Nucleotide Sequence:NM_001316981.2Link to Protein Sequence:NP_001303910.1Re-query CCDS DB by Nucleotide ID:NM_001316981Re-query CCDS DB by Protein ID:NP_001303910Link to BLAST:NP_001303910.1
Original member Current member NCBI NM_001316982.2 NP_001303911.1 Accepted alive Link to Nucleotide Sequence:NM_001316982.2Link to Protein Sequence:NP_001303911.1Re-query CCDS DB by Nucleotide ID:NM_001316982Re-query CCDS DB by Protein ID:NP_001303911Link to BLAST:NP_001303911.1
Original member Current member NCBI NM_032792.4 NP_116181.1 Accepted alive Link to Nucleotide Sequence:NM_032792.4Link to Protein Sequence:NP_116181.1Re-query CCDS DB by Nucleotide ID:NM_032792Re-query CCDS DB by Protein ID:NP_116181Link to BLAST:NP_116181.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001303907.1 511 Q96K62 511 100% 0 0
NP_001303908.1 511 Q96K62 511 100% 0 0
NP_001303910.1 511 Q96K62 511 100% 0 0
NP_001303911.1 511 Q96K62 511 100% 0 0
NP_116181.1 511 Q96K62 511 100% 0 0

Chromosomal Locations for CCDS 12984.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58514054 58514310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58516395 58517673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGCAGAACTTCTCACGCTCTCTGCTTGAGACCCTCA
ATGGGCAGAGGCTTGGGGGACACTTCTGTGACGTGACTGTGCGCATTCGTGAAGCTTCGCTGCGTGCCCA
CCGCTGCGTGCTGGCGGCCGGCTCACCCTTCTTCCAAGACAAGCTGCTGCTCGGCCACTCTGAGATCCGT
GTGCCTCCGGTGGTGCCCGCGCAGACAGTGCGACAGCTGGTAGAGTTCCTGTACAGCGGTTCGCTCGTTG
TGGCGCAGGGTGAAGCCCTGCAGGTGCTCACGGCCGCGTCAGTGCTTCGCATACAGACAGTTATCGACGA
ATGCACGCAGATTATCGCCCGCGCTCGAGCCCCGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTG
CCCCCGCCACTCGCACCTGCGCAGCTGCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCCGGGGC
ACCCCGGTGCTGCACACAGCCGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAACACC
TGCCAAGGCTGAGGGGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATGACCGAGGTGACGAGGAT
GACGAGGAAAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCAGGCGAGGGCCAGGCAC
CTCCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTGACAGCGCGTGCGAGGAGCCCCC
TGCACCCACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGATTTTCTTCGGGGAGCTGGGTCAGCTGAG
GACGTATTTCCAGACAGCTATGTATCCACTTGGCACGACGAGGATGGCGCTGTCCCCGAAGGCTGTCCCA
CTGAGACCCCTGTCCAGCCCGACTGCATACTGTCTGGATCCCGCCCGCCTGGTGTGAAGACCCCAGGGCC
GCCCGTTGCACTCTTCCCCTTTCACTTGGGTGCCCCTGGGCCACCCGCACCACCCCCTTCAGCACCATCG
GGGCCAGCCCCTGCGCCCCCACCCGCCTTCTACCCCACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGC
TGGGGGAGGTCCCGGCTCCCTCTGCTGCTCCCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAGG
TGCTGAGCCACCTACGTATGAGTGCAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTACACCAAG
CACATGTTCATCCACTCGGGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTCTACGCG
ACTACCTGCTCAAACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGTCTGCGCCAAGCG
CTTCACGCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCGGCCCGAGCGCGCGCCCTGCCCCGCC
TGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGGCGGCGCACCCTGCGCCCTGA

Translation (511 aa):
MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLLGHSEIR
VPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAPGTSAPTPLPTPV
PPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEGPDADPSLSAAPDDRGDED
DEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEPPAPTGLADYSGAGRDFLRGAGSAE
DVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPPGVKTPGPPVALFPFHLGAPGPPAPPPSAPS
GPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAPTTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTK
HMFIHSGEKPHQCAVCWRSFSLRDYLLKHMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPA
CGKVFSHRALLERHLAAHPAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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