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Report for CCDS33960.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
33960.1 |
Public |
Homo sapiens |
4 |
ZNF518B |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:85460](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:33960.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 33960.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000326756.4 |
ENSP00000317614.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000326756.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000317614.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000326756](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000317614](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375816.1 |
NP_001362745.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375816.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362745.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375816](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362745](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362745.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375817.1 |
NP_001362746.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375817.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362746.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375817](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362746](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362746.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_053042.3 |
NP_444270.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_053042.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_444270.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_053042](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_444270](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_444270.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 33960.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3225 nt): ATGAAGGATATTGGACAGCAGCTATACACTACACACTTGAACGGCGGACATAATTCCTTGACCATGTCAC CCAAACAGCCTGATGCTAATGGAGCACCTCGGCCAAATAGACAAGAAGCACAAACCCTTTTGTATCAAGG CTCAGAGGCAGAGGCTGCCATGATGACCATTGCTACATGTGCAAAGTGCAAAAGTGTTCACAAGATCTCT CTTCAAGATTTGCAGAAGGGTACAGGGAAGGACGGTATGTATGTCTGCTTCCAGTGCAGCCTCGGTGCAG CTCCTCCCAATTTTCATTTTGTGAGCAATAATTCCAGTGCGACTCATGTTGGAAATAAAACTGAAAACTT CTCAAGTTCTGTCAATAGCAAATTTAAGGTAAGGAACTTTAAGCCAGGCAAATACTATTGTGATAAATGT CGATTCTCTACAAAGGACCCGCTGCAGTACAAAAAGCACACCCTTCAACACGAGGAGATTAAATTCATTT GTTCTCACTGCAGCTACATTTCGTATACGAAAGGAGAGTTTCAGAGGCATTTGGTGAAACACACAGGCAT ATTTCCTTATCAGTGTGAGTATTGTGACTATGGTGCTATTAGAAATGATTATATTGTCAAACACACGAAG AGAGTACATGAAAGGGCAGGTGCGAAACGGCCAGTCAAAGCTGTTGCCAAGCTGGAGCCAAAAAGAACCG GAACTTCAAAACAAAACCCAGAGCTTCTAAAAGCTTCCAATCCACGGACTACATTTCAAAATAAGTGGTC AGACCAACTGTCAGGTTTCTCTCTCCATGCAAATAAAGACAAAATGCACAATATCATGTTGTTACCTGAA CCAAAGGAATACCAAAAAGATGTAGTTTGTATTCCAAATAAAATGACCCTGTCTGAGCCAAATGAAGTCA ACCTATTTGAGAACAAAAATGTTGAAGTAGAAGTGTTATCCCCTGCAAAAGAACCTGTTCAGCCAGGTAT GCCATTGACAGTTGTTGCACCAGCAGAACTAGTTGTCCCTGCAAACTGTTTAGCCCAGTTGATAGATGTG AAGGTTGTCAATGGTACACAGCAGCTTGTTCTGAAACTGTTTCCGCTGGAAGAAAATAATTGCCTTGAAG CTGGGAGGGATAATGGAGGTAATTCTGAACGTATGGTGAAAGAGAAGGGTTCAAATGAACAAGAAAAAGT ACTTTCTGCAGAAAAAACAAAGTCACTGACAGTTGACGGGAATGTTGGAAAACTCGTAGGCATTGATAGT TTTCAACCTTCAGTTCAGAAACAGCTTAAAAATGTGAAATGGGTAAGGTCTTATGATTTTATTATGCCAA ATTCTAGTGTGCACAACAATGGAAAATCCTTCATTAATTCGGAAACAATTGAGGATTTTCAGAAAAAAAA TAATTTGTATCCACATAGAACTGCTTTTCCTTCCGTTGCCTTAAAAGGTCATTCTCTAGCATCTGTATTT AAAAACAGTGTTTTACGTAGTCTTGGAGCTGCATCAAACCCTTTTCCATATAAAGCTGCTGTTTGTTTTG CTGAAAGTGGAAGAAATTTACACAGTAGCTCACAGCAGTTACTCCCATTTGCTGCATCACCTGCAACCTG TTCCTTCTCTGGAGAAAAGGGCTTATTGCCTGTAAGTGAAAATGACTTGGAATCTACAAGTAAAGTCAAT ATTCCTGTAAAAGTGGTTTCCTCTAATAGGAAGCAGGAAGATAACCAGACAGAGGAACACAAGGCAGTTT CAACTGTAGGCCAGATTTCCTCTCAACATAAGAGTGAGTATTTACATATAAACATAACTGGAGAAGATAG ATCTCAACAGCCTGGGGATAAGCCTTTGGAATTAAAGAATTCTGAAAGGACTAACAACACTAATGATGGC CCAGTCATCTCATCAGTATTTTCTCTGAGCTCTGGATCTGAAAATGTCCCCGAGGGCATTAAGTGGAATA GCTCAACGTCTAAAATAAAGTCAATTGAACTGTTGCGCAGAAAGATAGCTCAGTTAATTGAGTCCTGTGG GAAGCCGTCATCTTTGGCTTCAAATAGTGCACATCGTCGCTCTGTAGGGCAGGCATCAAAGGGAACTTCA AAAGCTACCTCTGAAGGTATTCAAGAAATCAACGTGTCACTCACTGGTCTTGGCCATTCCACAGGTACTC TTCAGAAACCTCCGAATGATGGTGGTATTACTGGTAATAGACAGCTTACTCATCAACAAATATATCCACA CTTTGCAGATGGCAGTAATAGGAAAACCAAAAGCAGAGTGGCCAGGAAGGCTCATGTTGCCACGCCAGTG TTAATCCCCAAAGGGGCTGTGTTGAGGGTTCTTAATTCCTCTGAGAATGCCCACATCATAGAGGCTACAT GTGAAGCACCTGTCAGCATACCTTGCAGTGAAAGACAGTTAATAAAACCAGTTCCATTTTGCCCTGTGAG ACAGGCGGACTCAGACTTACAGCCTTTAAGAAGTGAAAGGGGGCCAATAGATATGTCCCCAAATATCGAG ACACCTCTGCGGCCTAAACTGAGAAAAGAGAGTGCTGTCTGTAGCACCATCCATAGAAAAACTGGCCTCT TGTATGGACAGCAAGGAAGCAGTGAATTAAATAAGCAAGGGAGACTGCTTTCCAGAAGTCTTTCTATAAG TAGAAATAAAACCAAACAAGTACACTTATCCAGGAAGAAAAACAAAATTCAAGCTGAACCTAGCCGCTGT CTCAAGGATCCTTCAATTTTTCAGGTTGCAAGGCAACTAAGACTGATAGCAGCTAAGCCAGATCAGTTGA TTAAGTGTCCCCGTCGGAACCAGCCAGTCATTGTGTTAAACCACCCTGATGTGGACTCGCCAGAAGTGAC CAATGTGATGAAGGTAATAAATAAATACAAAGGCAATGTCCTCAAAGTTGTTTTATCAGAGAGGACTAGG TGTCAGCTAGGCATCAGACGGCATCATGTACGCCTGACCTACCAGAATGCGGAAGAAGCCAGTCAAATTA AAAGGCAAATGATGTTGAAAATGAAACTCAAAAAAGTTCATAAAAACAACTACCAGGTAGTGGATTCCTT GCCTGATGATTCTTCACAGTGTGTATTTAAGTGCTGGTTTTGTGGGCGACTGTATGAAGACCAGGAAGAG TGGATGAGTCATGGCCAACGGCATTTGATAGAAGCAACTAGAGATTGGGATGTTCTTTCCTCCAAGGGCA AATAA
Translation (1074 aa): MKDIGQQLYTTHLNGGHNSLTMSPKQPDANGAPRPNRQEAQTLLYQGSEAEAAMMTIATCAKCKSVHKIS LQDLQKGTGKDGMYVCFQCSLGAAPPNFHFVSNNSSATHVGNKTENFSSSVNSKFKVRNFKPGKYYCDKC RFSTKDPLQYKKHTLQHEEIKFICSHCSYISYTKGEFQRHLVKHTGIFPYQCEYCDYGAIRNDYIVKHTK RVHERAGAKRPVKAVAKLEPKRTGTSKQNPELLKASNPRTTFQNKWSDQLSGFSLHANKDKMHNIMLLPE PKEYQKDVVCIPNKMTLSEPNEVNLFENKNVEVEVLSPAKEPVQPGMPLTVVAPAELVVPANCLAQLIDV KVVNGTQQLVLKLFPLEENNCLEAGRDNGGNSERMVKEKGSNEQEKVLSAEKTKSLTVDGNVGKLVGIDS FQPSVQKQLKNVKWVRSYDFIMPNSSVHNNGKSFINSETIEDFQKKNNLYPHRTAFPSVALKGHSLASVF KNSVLRSLGAASNPFPYKAAVCFAESGRNLHSSSQQLLPFAASPATCSFSGEKGLLPVSENDLESTSKVN IPVKVVSSNRKQEDNQTEEHKAVSTVGQISSQHKSEYLHINITGEDRSQQPGDKPLELKNSERTNNTNDG PVISSVFSLSSGSENVPEGIKWNSSTSKIKSIELLRRKIAQLIESCGKPSSLASNSAHRRSVGQASKGTS KATSEGIQEINVSLTGLGHSTGTLQKPPNDGGITGNRQLTHQQIYPHFADGSNRKTKSRVARKAHVATPV LIPKGAVLRVLNSSENAHIIEATCEAPVSIPCSERQLIKPVPFCPVRQADSDLQPLRSERGPIDMSPNIE TPLRPKLRKESAVCSTIHRKTGLLYGQQGSSELNKQGRLLSRSLSISRNKTKQVHLSRKKNKIQAEPSRC LKDPSIFQVARQLRLIAAKPDQLIKCPRRNQPVIVLNHPDVDSPEVTNVMKVINKYKGNVLKVVLSERTR CQLGIRRHHVRLTYQNAEEASQIKRQMMLKMKLKKVHKNNYQVVDSLPDDSSQCVFKCWFCGRLYEDQEE WMSHGQRHLIEATRDWDVLSSKGK
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