CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS40540.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40540.1 |
Public |
Mus musculus |
9 |
Ubtfl1 |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40540.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000098973.2 |
ENSMUSP00000096572.2 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000169398.2 |
ENSMUSP00000126540.1 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000164441.1 |
ENSMUSP00000129611.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001033793.3 |
NP_001028965.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001360216.1 |
NP_001347145.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 40540.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1185 nt): ATGACATCACTTGATAACCAAGGCCTTTGGTCTGAAAAAGACATTCTGAAGTTACTGGAATGCATGGAGC ATAATATCCCATCAGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCGATCTAAACTGGAGCAAAGTAGC TTTTGGACTGTTTTCAGGAGAAATGTGCAAACAGAAATGGATGGAGATTTCTTATAATTTAAGGAAGTTC CGCACACTGACAGAATTAGTGCAAGAAGCCAAGTTTTCTTTTACAAAAAAAACTCACAAAAATAAAATAC TCACGGAGCATCCTGACCGACCCAAAAGACCCTTGACTGCCTATCTGCGCTTTTACAAGGAACAGAGAGC CAAATACTGTCAGATGTACCCTAAGTACAGCAACGCACAGCTGACCAAAATCCTGGCTGAGAAATACCGT CAGCTGCCAGCAGAGATAAAGCAGAGATATATCATGGACTTCAAGAAGGAGAAAGAAGACTTTCAGAAAA AGATGAGGCAATTCAAGAAAAGACATCCTGTTTCAGGGCATCCTAAGAAATCTGTGGTGCCCCAGAGTCA CCCAACCAAAGTCCCTACGAAGTCACAAGGAGATATAAAAAATGTAAAGTCTCTTGTAAAAACAGAATCT CCCAGAACAGTTTCTTCAGATATGAAATTTCAGGGAGAACCCAGGAAACCCCCTATGAATGCATATCACA AATTTCACCAAGAGTCATGGTCAAGTCCGGAGCTGAGGCATCTGTCCTTTAGGAAGCGCTGGGTTGAAAT TAGCAGGCGTTGGCATCAAGTCCCAGAGAACGAGAAAGAGCATTATAGCAATCAGGTCAAGAGGCTACAG AAACAATACAGGGTGAAGCTGGATCTCTGGCTCAAGAGATTGTCTCCTGAGGAATATGCTGCATACAAAG AGGCAAAGGCCACCTGTGGTAAGCGAAAGAACATGAGCATGTCTGGAGGCAGAAGCTCCAAGTTTGGACG AACAGAGCAGTCCTCCTCAGAGAAAGGCCTTCAAATAAAGCCTGGAGAGGTAGAGGAGCTATTAGATCCT GGGACAGATTCCTCAGGGACTATTCAGGGTCATCATGATGGCGCCCAGTCATCCAGGCAAGATTTCACGG ATGATAGTGAAGAAGACGACTCTAGCACCTCCTCAGATTCTAGTAGTACAGATGAAGATGATTAA
Translation (394 aa): MTSLDNQGLWSEKDILKLLECMEHNIPSDDSREFKKSQADLNWSKVAFGLFSGEMCKQKWMEISYNLRKF RTLTELVQEAKFSFTKKTHKNKILTEHPDRPKRPLTAYLRFYKEQRAKYCQMYPKYSNAQLTKILAEKYR QLPAEIKQRYIMDFKKEKEDFQKKMRQFKKRHPVSGHPKKSVVPQSHPTKVPTKSQGDIKNVKSLVKTES PRTVSSDMKFQGEPRKPPMNAYHKFHQESWSSPELRHLSFRKRWVEISRRWHQVPENEKEHYSNQVKRLQ KQYRVKLDLWLKRLSPEEYAAYKEAKATCGKRKNMSMSGGRSSKFGRTEQSSSEKGLQIKPGEVEELLDP GTDSSGTIQGHHDGAQSSRQDFTDDSEEDDSSTSSDSSSTDEDD
|