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Report for CCDS21030.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21030.1 Public Mus musculus 7 Zfp60 23 108 98 CCDS HistoryNCBI Gene:22718Re-query CCDS DB by CCDS ID:21030.1Re-query CCDS DB by GeneID:22718See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21030.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042641.13 ENSMUSP00000036627.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042641.13Link to Ensembl Protein Viewer:ENSMUSP00000036627.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000042641Re-query CCDS DB by Protein ID:ENSMUSP00000036627
Original member Current member EBI ENSMUST00000108336.7 ENSMUSP00000103973.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108336.7Link to Ensembl Protein Viewer:ENSMUSP00000103973.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108336Re-query CCDS DB by Protein ID:ENSMUSP00000103973
Original member Current member EBI ENSMUST00000167955.1 ENSMUSP00000132607.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167955.1Link to Ensembl Protein Viewer:ENSMUSP00000132607.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167955Re-query CCDS DB by Protein ID:ENSMUSP00000132607
Original member Current member NCBI NM_009560.2 NP_033586.2 Accepted alive Link to Nucleotide Sequence:NM_009560.2Link to Protein Sequence:NP_033586.2Re-query CCDS DB by Nucleotide ID:NM_009560Re-query CCDS DB by Protein ID:NP_033586Link to BLAST:NP_033586.2
Original member Current member NCBI NM_029531.2 NP_083807.2 Accepted alive Link to Nucleotide Sequence:NM_029531.2Link to Protein Sequence:NP_083807.2Re-query CCDS DB by Nucleotide ID:NM_029531Re-query CCDS DB by Protein ID:NP_083807Link to BLAST:NP_083807.2

Chromosomal Locations for CCDS 21030.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27736956 27736988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27738303 27738429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27740957 27741055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27748168 27750023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGGCCAACTCTAGTTCTCAACACATGGTCTGTGGGTCAGTGACATTTAGGGATGTGGCTGTTGACTTCT
CTCAGGAGGAGTGGGCCTGCCTGGATGCTACTCAGAAGGTCTTATACAGGAACATAATGTTGGAGACCTA
CAGCAACCTGGTCGCAGTGGTGGGACGTTGCATTCCCAAGCCAGATCTGATCGTCTTACTAGAGCAGGAG
AAAGAGCCCTGGATGGCTGTGAAGAAAGAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGTTTTGAAG
CTGAAAATAGATCTCCAAAGAATCATGTTTATAATAAAAAGTTACCCAAACAAACCATACAGCAATTAAG
TAAAACTTCGGACGTCCAGGGCGTCAGTGTTAGTAATGGCCCTGGCTATAGTGTAATCAAGGAGCCACAG
AATTATCAAGAAGGAGATGCTAATCGAAATATTACTAACAAGAAAGAAATGTCTACTTACACTAGCAAGA
CTCTTGCTCACAATAAAGAAAAACCGTATAAATGTAAAGACTGTGGGAAGTGCTTTGGTTGTAAGTCAAA
CCTTCATCAGCATGAGAGTATTCACACTGGAGAGAAGCCCTATGAATGTAAGGACTGTGGGAAGACCTTC
AGACTCCCTCAGATGCTTTCAAGACATCAGAAGTCTCACAGTGATGAGAGACCTTTTGAGTGTAATATAT
GTGGAAAGTCTTTTCATCTTCCTACCCTGCTTCAGTACCATAAAAATATTCATACAGGTTTAAAACCATT
TGAATGTGAGGAGTGTGGGAAGTCCTTCAACCGCATCTCTACCCTTTTTCAGCATAGGACTATTCATGCT
GGTATGAAACCGTATAAATGTAATGTGTGTGGGAAAGCCTTTAATCGTCGCTCAAACCTCCTGCAACATC
AGAAAATTCATTCTGAGGACAGACCTTTTCATTGTAAGGTGTGTGGAAAGGCCTTCACTGTGCTGGCTCA
GCTTACTCGGCACGAGAACATTCACACTGAAGACAAATCGTTTGAATGTAAGCAGTGTGGTAAGATATTT
AGTAATGGCTCTTACCTCTTACGACACTACGATACTCACACCAATGAGAAACCCTTTGAGTGTAATATAT
GTGGCAAGGCTTTTAGGCTTCATCTATACCTTTCTGAGCATCAGAAAACTCACACCGATGAGAAGCCTTT
CAAGTGTAAGCTGTGTGAGTCAGCCTTCAGACGTAAGTACCAGCTCAGTGAACATCAGAGAATTCACACT
GATGTGAAACCCTATCAGTGCAAGGATTGTGGGAAATTCTTTCGTCGACGATCAAATTTTACTGAACATC
AGAGTATTCACACTGGAAAGAAACCCTTTGAGTGTAAGGACTGTGGGAAGGTCTTTAGACTAAATATACA
TCTCATTCGACATCAGAGATTTCATAGTGATGAGAAGCCCTTTGAATGTAAAGAATGTGGAAAGGCTTTT
CATTTTTCCAGCCAGCTTAATAACCATAAAACCAGTCATACAGGTCAGACACCTTTTGAATGTAAAGAAT
GTGGGAAGTCGTTTAAGCGTGTCTCCAGCCTTGTGGAACATAGGATTATTCACAGTGGTGTGAAACCATA
TAAATGTAATGCGTGTGGAAGAGCCTTCAATCGTCGCTCAAACCTCATGCAACATGAGAAAATTCATTCT
GATGAGAGACCCTTTGAGTGTAAGGACTGTGGAAAGGCCTTCACTGTTCTGGCTCAGCTCACACGGCACC
AGACGATTCATAATGGAAAGAAATCATATGAATGTGAGCAGTGTGGGTCAGCCTTCAGACTCCCGTACCA
ACTCACTCAACATCAGAGAATTCATTATGATGTGAAGCCATTTCAGTGCAAGGAATGTGGAAAGGGCTTT
GTTCGTAGTACAGGCCTTAGAATTCATGAAAGGATCCACACTGGTGAGAAGCCCTTTCAGTGTAAGGAGT
GTGGAGAAGCCTTTCAGTATCATTACCAATTTCTTGGACACTTTAGAATTCATACTGGCAAGAACCCTTA
TGAATGTAGTGAATGTGGGAAGTACTTTACTTATGGTCGAGACCTTAAAGTACATCAGAGTATTCACAAT
CTTGAGAAACCGTAA

Translation (704 aa):
MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEQE
KEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQ
NYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTF
RLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFNRISTLFQHRTIHA
GMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIF
SNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHT
DVKPYQCKDCGKFFRRRSNFTEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAF
HFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHS
DERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGKGF
VRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHN
LEKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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