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Report for CCDS2385.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2385.1 Public Homo sapiens 2 MAP2 24 110 108 CCDS HistoryNCBI Gene:4133Re-query CCDS DB by CCDS ID:2385.1Re-query CCDS DB by GeneID:4133See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2385.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361559.8 ENSP00000355290.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361559.8Link to Ensembl Protein Viewer:ENSP00000355290.4Re-query CCDS DB by Nucleotide ID:ENST00000361559Re-query CCDS DB by Protein ID:ENSP00000355290
Original member Current member EBI ENST00000392194.5 ENSP00000376032.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392194.5Link to Ensembl Protein Viewer:ENSP00000376032.1Re-query CCDS DB by Nucleotide ID:ENST00000392194Re-query CCDS DB by Protein ID:ENSP00000376032
Original member Current member NCBI NM_001363913.2 NP_001350842.1 Accepted alive Link to Nucleotide Sequence:NM_001363913.2Link to Protein Sequence:NP_001350842.1Re-query CCDS DB by Nucleotide ID:NM_001363913Re-query CCDS DB by Protein ID:NP_001350842Link to BLAST:NP_001350842.1
Original member Current member NCBI NM_001375493.1 NP_001362422.1 Accepted alive Link to Nucleotide Sequence:NM_001375493.1Link to Protein Sequence:NP_001362422.1Re-query CCDS DB by Nucleotide ID:NM_001375493Re-query CCDS DB by Protein ID:NP_001362422Link to BLAST:NP_001362422.1
Original member Current member NCBI NM_001375583.1 NP_001362512.1 Accepted alive Link to Nucleotide Sequence:NM_001375583.1Link to Protein Sequence:NP_001362512.1Re-query CCDS DB by Nucleotide ID:NM_001375583Re-query CCDS DB by Protein ID:NP_001362512Link to BLAST:NP_001362512.1
Original member Current member NCBI NM_031845.3 NP_114033.2 Accepted alive Link to Nucleotide Sequence:NM_031845.3Link to Protein Sequence:NP_114033.2Re-query CCDS DB by Nucleotide ID:NM_031845Re-query CCDS DB by Protein ID:NP_114033Link to BLAST:NP_114033.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350842.1 471 P11137-2 471 100% 0 0
NP_001362422.1 471 P11137-2 471 100% 0 0
NP_001362512.1 471 P11137-2 471 100% 0 0
NP_114033.2 471 P11137-2 471 100% 0 0

Chromosomal Locations for CCDS 2385.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 209653171 209653432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209678572 209678685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209680750 209680827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209700277 209700338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209705580 209705727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209709914 209710254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209725709 209725790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209729850 209729962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 209730182 209730397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1416 nt):
ATGGCAGATGAACGGAAAGATGAAGCAAAGGCACCTCACTGGACCTCAGCACCGCTAACAGAGGCATCTG
CACACTCACATCCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGAAGGACTTGTCCGAAGCGCCAATGG
ATTCCCATACAGGGAGGATGAAGAGGGTGCCTTTGGAGAGCATGGGTCACAGGGCACCTATTCAAATACC
AAAGAGAATGGGATCAACGGAGAGCTGACCTCAGCTGACAGAGAAACAGCAGAGGAGGTGTCTGCAAGGA
TAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGAGAAAGAAGCTCAACATAA
AGACCAGACTGCAGCTCTGCCTTTAGCAGCTGAAGAAACAGCTAATCTGCCTCCTTCTCCACCCCCATCA
CCTGCCTCAGAACAGACTGTCACAGTGGAGGAAGCAGCAGGTGGGGAATCAGCTCTGGCTCCCAGTGTAT
TTAAACAGGCAAAGGACAAAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAG
ACCTTCCTCCATTCTCCCTCCTCGGCGAGGTGTGTCAGGAGACAGAGATGAGAATTCCTTCTCTCTCAAC
AGTTCTATCTCTTCTTCAGCACGGCGGACCACCAGGTCAGAGCCAATTCGCAGAGCAGGGAAGAGTGGTA
CCTCAACACCCACTACCCCTGGGTCTACTGCCATCACTCCTGGCACCCCACCAAGTTATTCTTCACGCAC
ACCAGGCACTCCTGGAACCCCTAGCTATCCCAGGACCCCTCACACACCAGGAACCCCCAAGTCTGCCATC
TTGGTGCCGAGTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGC
TTCGGCTTATTAACCAACCACTGCCAGACCTGAAGAATGTCAAATCCAAAATCGGATCAACAGACAACAT
CAAATACCAGCCTAAAGGGGGGCAGGTACAAATTGTTACCAAGAAAATAGACCTAAGCCATGTGACATCC
AAATGTGGCTCTCTGAAGAACATCCGCCACAGGCCAGGTGGCGGACGTGTGAAAATTGAGAGTGTAAAAC
TAGATTTCAAAGAAAAGGCCCAAGCTAAAGTTGGTTCTCTTGATAATGCTCATCATGTACCTGGAGGTGG
TAATGTCAAGATTGACAGCCAAAAGTTGAACTTCAGAGAGCATGCTAAAGCCCGTGTGGACCATGGGGCT
GAGATCATTACACAGTCCCCAGGCAGATCCAGCGTGGCATCACCCCGACGACTCAGCAATGTCTCCTCGT
CTGGAAGCATCAACCTGCTCGAATCTCCTCAGCTTGCCACTTTGGCTGAGGATGTCACTGCTGCACTCGC
TAAGCAGGGCTTGTGA

Translation (471 aa):
MADERKDEAKAPHWTSAPLTEASAHSHPPEIKDQGGAGEGLVRSANGFPYREDEEGAFGEHGSQGTYSNT
KENGINGELTSADRETAEEVSARIVQVVTAEAVAVLKGEQEKEAQHKDQTAALPLAAEETANLPPSPPPS
PASEQTVTVEEAAGGESALAPSVFKQAKDKVSDGVTKSPEKRSSLPRPSSILPPRRGVSGDRDENSFSLN
SSISSSARRTTRSEPIRRAGKSGTSTPTTPGSTAITPGTPPSYSSRTPGTPGTPSYPRTPHTPGTPKSAI
LVPSEKKVAIIRTPPKSPATPKQLRLINQPLPDLKNVKSKIGSTDNIKYQPKGGQVQIVTKKIDLSHVTS
KCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHHVPGGGNVKIDSQKLNFREHAKARVDHGA
EIITQSPGRSSVASPRRLSNVSSSGSINLLESPQLATLAEDVTAALAKQGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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