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Report for CCDS2427.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2427.1 Public Homo sapiens 2 CDK5R2 24 110 108 CCDS HistoryNCBI Gene:8941Re-query CCDS DB by CCDS ID:2427.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2427.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302625.6 ENSP00000304250.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302625.6Link to Ensembl Protein Viewer:ENSP00000304250.4Re-query CCDS DB by Nucleotide ID:ENST00000302625Re-query CCDS DB by Protein ID:ENSP00000304250
Original member Current member NCBI NM_003936.5 NP_003927.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003936.5Link to Protein Sequence:NP_003927.1Re-query CCDS DB by Nucleotide ID:NM_003936Re-query CCDS DB by Protein ID:NP_003927Link to BLAST:NP_003927.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003927.1 367 Q13319 367 100% 0 0

Chromosomal Locations for CCDS 2427.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 218959821 218960924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGGGCACAGTGCTGTCTCTTTCGCCTGCCTCCTCGGCCAAGGGCCGGAGGCCCGGCGGGCTGCCCGAGG
AGAAGAAGAAGGCGCCGCCCGCGGGGGACGAGGCGCTGGGGGGCTACGGGGCGCCGCCAGTGGGCAAGGG
CGGCAAAGGCGAGAGCCGACTCAAGCGGCCGTCCGTGCTCATCTCGGCGCTCACCTGGAAGCGCCTGGTG
GCCGCGTCCGCCAAGAAGAAGAAAGGCAGCAAGAAGGTGACACCCAAGCCGGCATCCACGGGCCCCGACC
CCCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGGGATCCCCCCGACGGCGGCGGCAC
CGCCAAGCCCCTGGCGGTGCCAGTGCCCACCGTGCCCGCGGCTGCCGCCACCTGCGAGCCACCGTCGGGG
GGCAGCGCGGCCGCTCAGCCGCCGGGCTCGGGCGGGGGAAAGCCTCCGCCGCCGCCTCCCCCAGCCCCGC
AGGTGGCGCCGCCGGTGCCTGGCGGCTCGCCGCGGCGGGTCATCGTGCAGGCGTCCACCGGCGAGCTGCT
GCGCTGTCTGGGCGACTTCGTGTGCCGACGCTGCTATCGCCTCAAGGAGCTGAGCCCGGGCGAGCTGGTG
GGCTGGTTCCGCGGTGTGGACCGCTCGCTGCTGCTGCAGGGCTGGCAAGACCAGGCCTTCATTACGCCTG
CAAACCTGGTGTTCGTGTACCTGCTGTGCCGCGAGTCGCTGCGTGGGGACGAGCTGGCGTCGGCCGCCGA
GCTGCAGGCCGCCTTCCTCACCTGCCTCTACCTCGCCTACTCCTACATGGGCAACGAGATCTCCTACCCA
CTCAAGCCCTTCCTCGTGGAGCCCGACAAGGAGCGCTTCTGGCAGCGCTGCCTGCGCCTCATCCAGCGGC
TCAGCCCGCAGATGCTGCGGCTCAACGCCGACCCCCACTTCTTCACGCAGGTCTTTCAAGACCTCAAGAA
CGAGGGCGAGGCCGCCGCCAGCGGCGGGGGCCCACCGAGCGGGGGCGCGCCCGCCGCCTCCTCGGCCGCC
AGGGACAGCTGCGCGGCCGGAACCAAGCACTGGACTATGAACCTGGACCGCTAG

Translation (367 aa):
MGTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLV
AASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSG
GSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQASTGELLRCLGDFVCRRCYRLKELSPGELV
GWFRGVDRSLLLQGWQDQAFITPANLVFVYLLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYP
LKPFLVEPDKERFWQRCLRLIQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAASGGGPPSGGAPAASSAA
RDSCAAGTKHWTMNLDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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