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Report for CCDS80971.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80971.1 Public Mus musculus 9 Glb1l2 23 108 98 CCDS HistoryNCBI Gene:244757Re-query CCDS DB by CCDS ID:80971.1Re-query CCDS DB by GeneID:244757See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80971.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066560.12 ENSMUSP00000066770.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066560.12Link to Ensembl Protein Viewer:ENSMUSP00000066770.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000066560Re-query CCDS DB by Protein ID:ENSMUSP00000066770
Original member Current member NCBI NM_001310768.1 NP_001297697.1 Accepted alive Link to Nucleotide Sequence:NM_001310768.1Link to Protein Sequence:NP_001297697.1Re-query CCDS DB by Nucleotide ID:NM_001310768Re-query CCDS DB by Protein ID:NP_001297697Link to BLAST:NP_001297697.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297697.1 636 Q3UPY5-1 636 99.8428% 0 1

Chromosomal Locations for CCDS 80971.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 26764737 26764823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26765102 26765218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26765580 26765691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26765985 26766072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26767077 26767155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26767395 26767466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26767720 26767860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26768419 26768525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26769036 26769116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26769740 26769877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26771028 26771112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26773973 26774043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26778019 26778100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26780674 26780766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26791782 26791890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26794083 26794178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26794786 26794854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26796406 26796603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26806298 26806383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1911 nt):
ATGCCCAAGTGGAGTCTGCGGCGGAGGCCAGGCCGCACACTCGGACTCCTGCTGCTGCTGGTCTTGAGCT
TCCTGGTGCTCCGCAGGTTGAACTGGAGCACTCTGGTTCCCCTATGGCTCCAACATCAGCGCCTGGGACT
TCGAACAAAAGGCCCAGACTTCATTCTGGAGGACTCCATCTTTCAGATTCTGGGGGGATCCATACACTAT
TTCCGTGTACCCAGGGAATACTGGAGGGACCGCCTGCTCAAATTGAAAGCCTGTGGCTTGAATACCCTTA
CCACCTATGTGCCATGGAACCTCCATGAGCCAGAAAGAGGCAAATTCGACTTCTCCGGGAACCTGGACCT
AGAGGCCTTTATCCAGCTGGCTGCAAAGATCGGGCTGTGGGTGATTCTGCGACCAGGGCCCTACATCTGT
AGTGAGATTGACCTCGGGGGCTTGCCCAGCTGGCTCCTCCAAGACCCTGACATGAAGCTGAGGACAACCT
ACCACGGCTTCACTAAGGCAGTGGATCTTTACTTTGACCACCTGATGTCCAGGGTGGTGCCACTTCAGTA
TAAGCATGGAGGACCTATCATCGCCGTGCAAGTGGAGAATGAATACGGTTCCTATAACAAAGACCGTGCA
TACATGCCTTACATCAAGAAGGCTTTGGAAGACAGAGGCATCATTGAGATGCTCCTGACCTCGGACAACA
AAGATGGCCTGGAAAAGGGAGTCGTTGATGGAGTGCTGGCCACCATCAACTTACAGTCGCAACAGGAGCT
GATGGCACTAAACACTGTTCTCTTATCTATACAGGGGATTCAACCCAAGATGGTGATGGAGTACTGGACA
GGGTGGTTTGACTCGTGGGGTGGCTCCCACAATATCTTGGATTCCTCTGAAGTCCTGCAAACAGTGTCTG
CCATCATCAAAGACGGCTCCTCCATCAACCTGTACATGTTCCATGGAGGCACAAATTTTGGCTTCATAAA
TGGAGCCATGCATTTTAATGACTACAAGGCTGATGTTACCAGCTATGACTATGATGCTATACTGACAGAG
GCTGGAGACTACACTGCCAAATACACCAAGCTTCGAGAACTCTTTGGAACTGTCTCAGGTATTCCTCCAC
CTCCTCCACCTGAGCTTACTGCTAAGATGGTCTATGAGCCAATGAGTCCAGCTCTCTACCTATCACTGTG
GGATGCTATCCAGTACATGGATAAGCCAGTCACATCTGAGACACCCATCAACATGGAGAACCTGCCAGTA
AACAATGGTAATGGGCAGGCCTTTGGGTATGTTCTGTATGAGACCACTATCTTTTCATCTGGTGTCCTCA
GTGGCCTCGTGCGTGACAGAGGACAGGTCTTTTTGAATAGAGTATCCATAGGATTCCTGGACTATAAAAC
AACAAAGATCACTATCCCCTTGACCCAGGGTTACACCATACTGAGGATCTTGGTGGAGAATCGTGGGCGA
GTCAACTATGGAAATAACATTGACAGTCAGCGCAAAGGTTTAATTGGAAATCTCTATCTGAATAATAAAG
CTCTGAAAAACTTCAAAATCTACAGCCTGGATATGACAAAGCAGTTCCTTCAGAGGTTCGACATGGACAA
CTGGAGTGTCATACCCAAAGAACTGACCTTTCCTGCTTTCTTCCTGGGTGCCTTGTCAGTTGGCATTTAC
CCTTCTGACACATTTCTGAAGTTGGAGGGCTGGGTGAAGGGGGTTGTATTCGTTAATGGGCACAACCTTG
GACGCTACTGGAATGTAGGACCTCAGGAGACTCTCTACCTCCCAGGTGTCTGGCTGGACAAAGGAATCAA
CAAGGTTATCATTTTTGAAGAGACAATGTCAGGCTCCATGGTCCAGTCTACTGATATCCCCCACCTGGGC
AGGAACCAGTACATTAACTGA

Translation (636 aa):
MPKWSLRRRPGRTLGLLLLLVLSFLVLRRLNWSTLVPLWLQHQRLGLRTKGPDFILEDSIFQILGGSIHY
FRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFIQLAAKIGLWVILRPGPYIC
SEIDLGGLPSWLLQDPDMKLRTTYHGFTKAVDLYFDHLMSRVVPLQYKHGGPIIAVQVENEYGSYNKDRA
YMPYIKKALEDRGIIEMLLTSDNKDGLEKGVVDGVLATINLQSQQELMALNTVLLSIQGIQPKMVMEYWT
GWFDSWGGSHNILDSSEVLQTVSAIIKDGSSINLYMFHGGTNFGFINGAMHFNDYKADVTSYDYDAILTE
AGDYTAKYTKLRELFGTVSGIPPPPPPELTAKMVYEPMSPALYLSLWDAIQYMDKPVTSETPINMENLPV
NNGNGQAFGYVLYETTIFSSGVLSGLVRDRGQVFLNRVSIGFLDYKTTKITIPLTQGYTILRILVENRGR
VNYGNNIDSQRKGLIGNLYLNNKALKNFKIYSLDMTKQFLQRFDMDNWSVIPKELTFPAFFLGALSVGIY
PSDTFLKLEGWVKGVVFVNGHNLGRYWNVGPQETLYLPGVWLDKGINKVIIFEETMSGSMVQSTDIPHLG
RNQYIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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