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Report for CCDS77196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77196.1 Public Homo sapiens 18 SERPINB11 24 110 108 CCDS HistoryNCBI Gene:89778Re-query CCDS DB by CCDS ID:77196.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)


Attributes
Polymorphic pseudogene

Sequence IDs included in CCDS 77196.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000623262.3 ENSP00000485532.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623262.3Link to Ensembl Protein Viewer:ENSP00000485532.1Re-query CCDS DB by Nucleotide ID:ENST00000623262Re-query CCDS DB by Protein ID:ENSP00000485532
Original member Current member NCBI NM_001291278.2 NP_001278207.1 Accepted alive Link to Nucleotide Sequence:NM_001291278.2Link to Protein Sequence:NP_001278207.1Re-query CCDS DB by Nucleotide ID:NM_001291278Re-query CCDS DB by Protein ID:NP_001278207Link to BLAST:NP_001278207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278207.1 305 Q96P15-2 305 100% 0 0

Chromosomal Locations for CCDS 77196.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63710194 63710361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63711335 63711394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63712565 63712693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63720831 63720986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63722995 63723399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGGTTCTCTCAGCACAGCTAACGTTGAATTTTGCCTTGATGTGTTCAAAGAGCTGAACAGTAACAACA
TAGGAGATAACATCTTCTTTTCTTCGCTGAGTCTGCTTTATGCTCTAAGCATGGTCCTCCTTGGTGCCAG
GGGAGAGACTGAAGAGCAATTGGAGAAGGTGCTTCATTTTAGTCATACTGTAGACTCATTAAAACCAGGG
TTCAAGGACTCACCTAAGTGCAGCCAAGCTGGAAGAATTCATTCCGAGTTTGGTGTCGAATTCTCTCAAA
TCAACCAGCCAGACTCTAACTGTACCCTCAGCATTGCCAACAGGCTCTACGGGACAAAGACGATGGCATT
TCATCAGGGTAAAAATGTAACTGTGGAAATGATGTATCAAATTGGAACATTTAAACTGGCCTTTGTAAAG
GAGCCGCAGATGCAAGTTCTTGAGCTGCCCTACGTTAACAACAAATTAAGCATGATTATTCTGCTTCCAG
TAGGCATAGCTAATCTGAAACAGATAGAAAAGCAGCTGAATTCGGGGACGTTTCATGAGTGGACAAGCTC
TTCTAACATGATGGAAAGAGAAGTTGAAGTACACCTCCCCCGATTCAAACTTGAAACTAAGTATGAGCTA
AATTCCCTGTTAAAATCTCTAGGGGTGACAGATCTCTTCAACCAGGTCAAAGCTGATCTTTCTGGAATGT
CACCAACCAAGGGCCTATATTTATCAAAAGCCATCCACAAGTCATACCTGGATGTCAGCGAAGAGGGCAC
GGAGGCAGCAGCAGCCACTGGGGACAGCATCGCTGTAAAAAGCCTACCAATGAGAGCTCAGTTCAAGGCG
AACCACCCCTTCCTTTTCTTTATAAGGCACACTCATACCAACACGATCCTATTCTGTGGCAAGCTTGCCT
CTCCCTAA

Translation (305 aa):
MGSLSTANVEFCLDVFKELNSNNIGDNIFFSSLSLLYALSMVLLGARGETEEQLEKVLHFSHTVDSLKPG
FKDSPKCSQAGRIHSEFGVEFSQINQPDSNCTLSIANRLYGTKTMAFHQGKNVTVEMMYQIGTFKLAFVK
EPQMQVLELPYVNNKLSMIILLPVGIANLKQIEKQLNSGTFHEWTSSSNMMEREVEVHLPRFKLETKYEL
NSLLKSLGVTDLFNQVKADLSGMSPTKGLYLSKAIHKSYLDVSEEGTEAAAATGDSIAVKSLPMRAQFKA
NHPFLFFIRHTHTNTILFCGKLASP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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