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Report for CCDS2994.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2994.1 Public Homo sapiens 3 CFAP91 24 110 108 CCDS HistoryNCBI Gene:89876Re-query CCDS DB by CCDS ID:2994.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2994.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273390.9 ENSP00000273390.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273390.9Link to Ensembl Protein Viewer:ENSP00000273390.5Re-query CCDS DB by Nucleotide ID:ENST00000273390Re-query CCDS DB by Protein ID:ENSP00000273390
Original member Current member EBI ENST00000648112.1 ENSP00000497876.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648112.1Link to Ensembl Protein Viewer:ENSP00000497876.1Re-query CCDS DB by Nucleotide ID:ENST00000648112Re-query CCDS DB by Protein ID:ENSP00000497876
Original member Current member NCBI NM_033364.4 NP_203528.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033364.4Link to Protein Sequence:NP_203528.3Re-query CCDS DB by Nucleotide ID:NM_033364Re-query CCDS DB by Protein ID:NP_203528Link to BLAST:NP_203528.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_203528.3 767 Q7Z4T9-7 767 100% 0 0

Chromosomal Locations for CCDS 2994.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 119703099 119703222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119706809 119706885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119707404 119707561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119708591 119708674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119709839 119709895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119715562 119715743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119726171 119726348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119730220 119730377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119732294 119732476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119733364 119733506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119737366 119737482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119739255 119739326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119740549 119740695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119743975 119744196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119747115 119747263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119747811 119747902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119750937 119751097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAGA
GG
TCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGATCCATTGTTTATTGT
G
TCAAGTGAGAAAGACCATACACAGGCAAATATCCAAGCTACCCTGATTCGCAGCAGACTGAGAAAAGTT
CCC
AGGTTTAAAACCATGTTCAGTAACCTGATCCATTATCCAAGATATTCTCTATATTGGAGCAAGTCAG
AT
CCTGTCCCACCATTTATCAGTCGGGAATGGAAGGGACATAAGGAGAAACACAGAGAAGCCCTCCGGCA
G
CTCACCACAACTGACGCTTCTTTTCAGATGCCTAAAGAAGTTTATGAAGATCCTGAAGTTACTGGAAAG
AAT
CGCTATAAATACTTTGAAAGGCCTTTTCTCCCATTTTTTCAGCAGATGCCATTCAATGTTGTTTATG
CC
GTATCCAAGGCAGAACCATACACTTTTCCTCCTACTTCTACTAAGCACCTATCCATCCCTTCAAAGTC
T
ACTGTGGGCACTCAGACTGATTATCGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATGTA
GTA
TGTCAGGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAG
GA
CAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCT
G
AGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAATGGAGAGGAAGGAGTGGGCCTTC
AGA
GAGCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGAAGTTCTAAAAGAGCTGTTGAGGAAGCGTG
AA
GAGAATCAGAATGAAGTGAATATGAAGCACTTGAATGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGA
G
GCAAAAATGGCAAAAATTCAGCGCACGCATGTATCAACAATCAGAAAACTTGTAGGAAAGAGAAAGAAT
ATA
GAAGGGAAGTTGGAGAGAAGAAATATCATCAAGGATTATTCTGATTATGCATCACAGGTCTATGGAC
CT
CTGTCTCGTCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTAAAAAACTACTATCTCAA
C
ACCTATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCCAAATCAGAGCT
CCA
AAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGG
CA
GAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAAGTTCTTGAAGTAAAGAAACCCCCTCGCTTCCT
T
CAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
GAA
ATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
AA
GGGAAAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGATGAAAA
G
CTGGTGAAAAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAG
GTG
TCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGT
CC
AAAGAGCTGGTGAGACTGCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCG
G
CGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCGCCTGCGGGAGGAGGACGAG
ATA
TTTAAGGAGGTGGTTAAAGTTCACCATAGTACTATAAGCTCCTACCTAGAAGACATAATACTGAATA
CC
GAAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGAAAATCAATGACAT
T
GCTTATGAAATGGAAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATAGT
TTT
CTGATCCCAGAGGTGCAAAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTC
TT
GCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAGAAATTAACTGAGGGAGAGCA
A
GATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAGAAACTCAAAATGAGAACAACAGCTAA


Translation (767 aa):
MSHAVTIEEPQAQPQVSQTRYRERSRAGSHISSNRAYDFLYDPLFIVSSEKDHTQANIQATLIRSRLRKV
P
RFKTMFSNLIHYPRYSLYWSKSDPVPPFISREWKGHKEKHREALRQLT
TTDASFQMPKEVYEDPEVTGK
N
RYKYFE
RPFLPFFQQMPFNVVYAVSKAEPYTFPPTSTKHLSIPSKSTVGTQTDYRDADVQTDPYSAEYV
V
CQDSIPELLTLATLTW
GRGLPAGQAEVEMIERAREKRAWEASLPALSDTSQFEKRRKMMNEMERKEWAF
R
EQEIE
KLQEIRLEVLKELLRKREENQNEVNMKHLNARWSKLQEGKEAKMAKIQRTHVSTIRKLVGKRKN
I
EGKLERRNIIKDYSDYASQVYGPLSRLGCFPDNNSEDFVVKNYYLNTYE
GLVELESCLPDFVTQPQIRA
P
KPKVITTKAGFLKRAARLDYELAEVHK
ALLDKKNKVLEVKKPPRFLQRNPIPQPRLPTPTLEMTSNEEE
E
MEMAVIYLQKLLRGRVVQNM
MFEGKEKRLELIQELRTCHALQEDEKLVKKAEKQVTLALQRQRNLHEHK
V
SLVENHLAGLEGRALADMFDFLSKELVRLQEERRIHAFVMLAERQRRVREAEESGRRQVEKQRLREEDE
I
FKE
VVKVHHSTISSYLEDIILNTEANTAEEQARAEIEKMAEKINDIAYEMESRRTYLQSEEIVAELVYS
F
LIPEVQKYFVKEK
VRNAQRKHILAAHQIIHSYTESMVQKKLTEGEQDEASNAAMLLEKETQNENNS



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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