NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32476.1 Public Homo sapiens 16 MTSS2 24 110 108 CCDS HistoryNCBI Gene:92154Re-query CCDS DB by CCDS ID:32476.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338779.11 ENSP00000341171.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338779.11Link to Ensembl Protein Viewer:ENSP00000341171.6Re-query CCDS DB by Nucleotide ID:ENST00000338779Re-query CCDS DB by Protein ID:ENSP00000341171
Original member Current member NCBI NM_138383.3 NP_612392.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138383.3Link to Protein Sequence:NP_612392.1Re-query CCDS DB by Nucleotide ID:NM_138383Re-query CCDS DB by Protein ID:NP_612392Link to BLAST:NP_612392.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612392.1 747 Q765P7-1 747 100% 0 0

Chromosomal Locations for CCDS 32476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 70663677 70664449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70664598 70664763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70664920 70665096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70665466 70665540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70674306 70674528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70676881 70676978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70677792 70677899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70678252 70678409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70679315 70679323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70679630 70679704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70679786 70679877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70679971 70680055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70680794 70680867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70680964 70681025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70685723 70685791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2244 nt):
ATGGAGACGGCGGAGAAGGAGTGCGGCGCCCTGGGCGGGCTCTTCCAGGCCATAGTCAACGACATGAAGA
GCTCCTACCCTATCTGGGAGGACTTCAACTCCAAGGCCACGAAGCTGCATTCCCAGCTGAGGACCACCGT
GCTGGCTGCTGTGGCCTTCCTGGATGCCTTCCAGAAAGTGGCTGACATGGCTACCAACACCCGAGGGGCC
ACGAGGGACATCGGCTCGGCGCTCACACGCATGTGCATGCGCCACCGCAGCATCGAGACCAAGCTGCGGC
AGTTCACCAACGCACTGCTGGAGAGCCTCATCAACCCGCTGCAGGAGCGCATCGAGGACTGGAAGAAGGC
GGCCAACCAGCTGGACAAGGACCACGCGAAAGAGTACAAACGAGCCCGGCATGAGATCAAAAAGAAGTCG
TCGGACACGCTGAAGCTGCAGAAGAAGGCGCGCAAAGAGCTACTTGGGAAAGGAGACCTGCAGCCCCAGC
TGGACAGTGCCCTGCAGGACGTCAACGACATGTACCTGCTGCTGGAGGAGACGGAGAAGCAGGCCGTGCG
CCGGGCGCTGATCGAGGAGCGGGGCCGCTTCTGCACCTTCATCACCTTCCTGCAGCCTGTGGTGAATGGA
GAGCTGACCATGCTGGGAGAGATCACCCACCTGCAGGGCATCATCGACGACTTGGTGGTGCTGACAGCAG
AACCCCACAAACTGCCTCCCGCCAGCGAGCAGGTAATCAAAGACCTAAAGGGCTCGGACTACAGCTGGTC
CTACCAGACCCCACCCTCATCACCCAGCAGCTCCAGCTCCCGGAAGTCCAGCATGTGCAGTGCCCCCAGC
AGCAGTAGCAGTGCCAAGGGTGGCGGAGCCCCATGGCCTGGGGGTGCCCAAACATACTCACCCAGTTCCA
CCTGTCGCTACCGCAGCCTGGCGCAGCCAGCCACCACCACCGCTCGCCTCTCCAGCGTTTCCTCCCATGA
CTCTGGCTTCGTCTCCCAGGACGCCACCTACTCCAAGCCCCCCTCGCCTATGCCTTCAGACATCACCAGC
CAGAAGTCCTCCAGCTCTGCATCTTCCGAGGCCTCGGAAACCTGCCAGTCCGTTAGCGAGTGCAGCTCCC
CCACCTCGGACTGGTCCAAGGTCGGCTCCCATGAGCAGCCCTCAGGCGCCACTCTGCAGCGGAGGAAGGA
CCGAGTGGAGCTCCTGCGAGACACAGAGCCAGGCCCTGCCAGTGGGGGCACCCTGGGCCCCAGCGGGGAA
GAGGCACCGCGACCCCGGATGTCCCCTGCCACCATCGCAGCCAAGCACGGTGAGGAGGTGTCCCCCGCCG
CCAGTGACCTGGCCATGGTGCTGACGCGGGGCCTGAGCCTGGAGCACCAGAAGAGCAGCCGGGACTCGCT
GCAGTACTCCAGCGGCTACAGCACGCAGACCACCACGCCCTCCTGCTCTGAGGACACCATCCCCTCCCAA
GGCTCCGACTACGACTGCTACTCCGTGAATGGGGATGCGGACAGCGAGGGCCCGCCCGAGTTTGACAAGT
CATCCACCATCCCGCGCAACAGCAACATCGCCCAGAACTACCGCCGCCTGATCCAGACCAAGCGCCCAGC
CTCCACTGCTGGGCTGCCCACCGCGGGGCTGCCCACGGCCACTGGCCTGCCCTCGGGCGCACCCCCCGGC
GTGGCCACCATCCGCCGCACACCCTCCACCAAGCCCACCGTGCGCCGCGCCCTGTCCAGCGCTGGCCCCA
TCCCCATCCGGCCGCCCATCGTCCCTGTGAAGACGCCCACGGTGCCTGACTCCCCCGGCTACATGGGGCC
CACACGGGCGGGCAGTGAGGAGTGCGTCTTCTATACCGACGAGACCGCCTCACCCCTGGCACCGGACCTC
GCCAAGGCCTCCCCAAAGAGGCTCAGCCTGCCCAACACAGCCTGGGGCAGCCCATCCCCAGAGGCAGCCG
GGTACCCCGGGGCAGGGGCCGAGGACGAGCAGCAGCAGCTGGCGGCCAACCGGCACAGCCTGGTGGAGAA
GCTGGGGGAGCTGGTGGCGGGTGCCCACGCACTGGGTGAGGGCCAGTTCCCCTTCCCCACTGCTCTGTCG
GCCACCCCCACGGAGGAGACGCCCACCCCACCCCCAGCCGCCACCAGCGACCCCCCGGCCGAAGACATGC
TGGTGGCCATCCGGCGTGGGGTCCGGCTCCGCAGGACCGTCACCAACGACAGGTCGGCGCCCCGCATCTT
ATGA

Translation (747 aa):
METAEKECGALGGLFQAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGA
TRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKAANQLDKDHAKEYKRARHEIKKKS
SDTLKLQKKARKELLGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNG
ELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPS
SSSSAKGGGAPWPGGAQTYSPSSTCRYRSLAQPATTTARLSSVSSHDSGFVSQDATYSKPPSPMPSDITS
QKSSSSASSEASETCQSVSECSSPTSDWSKVGSHEQPSGATLQRRKDRVELLRDTEPGPASGGTLGPSGE
EAPRPRMSPATIAAKHGEEVSPAASDLAMVLTRGLSLEHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQ
GSDYDCYSVNGDADSEGPPEFDKSSTIPRNSNIAQNYRRLIQTKRPASTAGLPTAGLPTATGLPSGAPPG
VATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPGYMGPTRAGSEECVFYTDETASPLAPDL
AKASPKRLSLPNTAWGSPSPEAAGYPGAGAEDEQQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALS
ATPTEETPTPPPAATSDPPAEDMLVAIRRGVRLRRTVTNDRSAPRIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH