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Report for CCDS23460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23460.1 Public Mus musculus 9 Acp3 23 108 98 CCDS HistoryNCBI Gene:56318Re-query CCDS DB by CCDS ID:23460.1Re-query CCDS DB by GeneID:56318See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23460.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062723.13 ENSMUSP00000059889.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062723.13Link to Ensembl Protein Viewer:ENSMUSP00000059889.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000062723Re-query CCDS DB by Protein ID:ENSMUSP00000059889
Original member Current member NCBI NM_207668.2 NP_997551.1 Accepted alive Link to Nucleotide Sequence:NM_207668.2Link to Protein Sequence:NP_997551.1Re-query CCDS DB by Nucleotide ID:NM_207668Re-query CCDS DB by Protein ID:NP_997551Link to BLAST:NP_997551.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997551.1 417 Q8CE08-2 417 100% 0 0

Chromosomal Locations for CCDS 23460.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 104291411 104291529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104300816 104300985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104306885 104306988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104309410 104309492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104314308 104314440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104316226 104316318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104319974 104320072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104324052 104324204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104324643 104324729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104326881 104326976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 104337543 104337659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGCGAGCCGTTCCTCTGCCCCTGAGCCGGACAGCAAGCCTCAGCCTTGGCTTCTTGCTCCTGCTTTCTC
TCTGCCTGGACCCAGGCCAAGCCAAGGAGTTGAAGTTTGTGACATTGGTGTTTCGGCATGGAGACCGAGG
TCCCATCGAGACCTTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACC
CAGTGGGGCATGGAACAGCACTACGAACTTGGAAGTTATATAAGGAAAAGATACGGAAGATTCTTGAACG
ACACCTATAAGCATGATCAGATTTATATCCGGAGCACAGATGTGGACAGGACTTTGATGAGTGCTATGAC
AAACCTTGCAGCCCTGTTTCCTCCAGAGGGGATCAGCATCTGGAATCCTAGACTGCTCTGGCAGCCCATC
CCAGTGCACACCGTGTCTCTCTCTGAGGATCGGTTGCTGTACCTGCCTTTCAGAGACTGCCCTCGTTTTG
AAGAACTCAAGAGTGAGACTTTAGAATCTGAGGAATTCTTGAAGAGGCTTCATCCATATAAAAGCTTCCT
GGACACCTTGTCGTCGCTGTCGGGATTCGATGACCAGGATCTTTTTGGAATCTGGAGTAAAGTTTATGAC
CCTTTATTCTGCGAGAGTGTTCACAATTTCACCTTGCCCTCCTGGGCCACCGAGGACGCCATGATTAAGT
TGAAAGAGCTATCAGAATTATCTCTGCTATCACTTTATGGAATTCACAAGCAGAAAGAGAAATCTCGACT
CCAAGGGGGCGTCCTGGTCAATGAAATCCTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAGTATAAA
AAGCTGGTCATGTATTCCGCACACGACACTACCGTGAGTGGCCTGCAGATGGCGCTAGATGTTTATAATG
GAGTTCTGCCTCCCTACGCTTCTTGCCACATGATGGAATTGTACCATGATAAGGGGGGGCACTTTGTGGA
GATGTACTATCGGAATGAGACCCAGAACGAGCCCTACCCACTCACGCTGCCAGGCTGCACCCACAGCTGC
CCTCTGGAGAAGTTTGCGGAGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCA
CAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTGCCTGGTAACCGGGATCCTGGTGAT
ACTTCTGCTTGTCCTCATCCGCCATGGGCCCTGCTGGCAGAGAGATGTGTATCGGAACATCTGA

Translation (417 aa):
MRAVPLPLSRTASLSLGFLLLLSLCLDPGQAKELKFVTLVFRHGDRGPIETFPTDPITESSWPQGFGQLT
QWGMEQHYELGSYIRKRYGRFLNDTYKHDQIYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPI
PVHTVSLSEDRLLYLPFRDCPRFEELKSETLESEEFLKRLHPYKSFLDTLSSLSGFDDQDLFGIWSKVYD
PLFCESVHNFTLPSWATEDAMIKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKYK
KLVMYSAHDTTVSGLQMALDVYNGVLPPYASCHMMELYHDKGGHFVEMYYRNETQNEPYPLTLPGCTHSC
PLEKFAELLDPVISQDWATECMATSSHQVLRVILATTFCLVTGILVILLLVLIRHGPCWQRDVYRNI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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