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Report for CCDS4323.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
4323.1 |
Public |
Homo sapiens |
5 |
FAM114A2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:10827](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:4323.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:10827](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 5 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 4323.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000351797.9 |
ENSP00000341597.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000351797.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000341597.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000351797](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000341597](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000520667.5 |
ENSP00000430384.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000520667.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000430384.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000520667](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000430384](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000522858.5 |
ENSP00000430489.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000522858.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000430489.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000522858](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000430489](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001317993.2 |
NP_001304922.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001317993.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001304922.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001317993](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001304922](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001304922.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001317994.2 |
NP_001304923.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001317994.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001304923.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001317994](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001304923](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001304923.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_018691.4 |
NP_061161.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_018691.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_061161.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_018691](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_061161](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_061161.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 4323.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1518 nt): ATGTCAGATAAAGATGATATTGAGACTCCACTGCTAACTGAAGCAGCCCCCATCCTTGAAGATGGAAACT GTGAGCCAGCCAAGAATTCTGAGTCTGTTGACCAAGGTGCCAAACCAGAGAGTAAATCAGAACCTGTAGT TTCCACTCGGAAAAGACCAGAGACCAAACCTTCCAGTGACCTTGAGACTTCAAAAGTTCTCCCTATTCAG GATAATGTTTCCAAAGATGTACCCCAGACCAGATGGGGTTATTGGGGGAGCTGGGGCAAGTCCATACTCT CCTCAGCCTCGGCTACAGTAGCTACAGTAGGACAAGGCATTTCAAATGTCATCGAGAAGGCAGAGACTTC CCTTGGAATCCCTGGTCCCAGTGAAATTTCAACTGAAGTCAAGTATGTAGCAGGAGAGACAAATGCCAAA GAGAATGAAAACTCCTCCCCAGTGGCTGGGGCATTTGGTGTATTCTCTACCATCTCTACTGCTGTTCAGA GCACAGGAAAGAGTGTTATAAGTGGGGGTTTGGATGCCTTAGAATTCATTGGAAAAAAGACAATGGATGT GATAGCAGAAGGGGATCCTGGATTTAAAAGAACCAAGGGTCTGATGAACCGAAATGCTACACTATCTCAG GTTTTACGAGAGGCGAAGGAGAAAGAAGAGATACGGACCTCCAATGAGGTTACCGTGGAAACAGACAAGA AAACTCATTATGGGCTACTCTTTGATGAATTTCAAGGCCTTTCACATCTAGAAGCTCTGGAGATGCTTTC CCAAGAAAGTGAAATAAAGGTGAAATCTATCCTTAATTCTCTGAGTGGAGAAGAATTAGAGACTCTAAAA GTTGAATTAGAGCAACTCAAAGAAACATTTTCTCTAGCAGAATTTTGTGAAGAAGAGGAAGAAGAGAAAA AAGGGGATGAAGATTTTACCAAGGACATAACAGAGCTGTTTTCCCAGCTGCACGTTTCCTCCAAACCAGA GAAACTTGCCAGGGCAAGAAATACCGCCCACGAATGGATCAGGAAGTCTCTGACCAAGCCATTAGCAGAG AATGAAGAAGGAGAAAAACAGTCGGAAGCAGAAAATACTGAGCAAGTCAACAAAAATTCAATAGAGGATA TCCATGCGTTTGCAATCCGGAGCCTGGCTGAACTGACTGCCTGCTCAATTGAACTATTCCACAAAACAGC TGCATTGGTTCTGCATGGCAGGAAGCAGGAAGTGACAGCCATAGAAAGGAGCCAAACTCTTTCCCAGATG ACAATTGTGTTGTGTAAAGAGTTGTCCTCTCTGTCTAAAGAGTTCACTACCTGCCTAACAACTGCTGGGG TCAAAGAAATGGCAGATGTCCTTAACCCATTAATCACTGCAGTATTTCTAGAGGCATCAAACAGTGCCTC CTACATCCAGGACGCCTTTCAGCTACTCTTACCTGTGCTAGAGATCTCTCTCATTGAGAACAAGATTGAA TCACACAGACATGAGCTGCAGGGCCAGAAACCTTTGTTAGAACATTGA
Translation (505 aa): MSDKDDIETPLLTEAAPILEDGNCEPAKNSESVDQGAKPESKSEPVVSTRKRPETKPSSDLETSKVLPIQ DNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGIPGPSEISTEVKYVAGETNAK ENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQ VLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLK VELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAE NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQM TIVLCKELSSLSKEFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLIENKIE SHRHELQGQKPLLEH
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