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Report for CCDS83253.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83253.1 Public Homo sapiens 8 DLC1 24 110 108 CCDS HistoryNCBI Gene:10395Re-query CCDS DB by CCDS ID:83253.1Re-query CCDS DB by GeneID:10395See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83253.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000512044.6 ENSP00000422595.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000512044.6Link to Ensembl Protein Viewer:ENSP00000422595.2Re-query CCDS DB by Nucleotide ID:ENST00000512044Re-query CCDS DB by Protein ID:ENSP00000422595
Original member Current member NCBI NM_001316668.2 NP_001303597.1 Accepted alive Link to Nucleotide Sequence:NM_001316668.2Link to Protein Sequence:NP_001303597.1Re-query CCDS DB by Nucleotide ID:NM_001316668Re-query CCDS DB by Protein ID:NP_001303597Link to BLAST:NP_001303597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001303597.1 1125 Q96QB1-6 1125 100% 0 0

Chromosomal Locations for CCDS 83253.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 13085811 13085931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13086290 13086463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13088487 13088704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13090252 13090470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13091318 13091432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13092612 13092825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13094759 13094957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13095086 13095245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13098399 13098575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13099347 13100770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13102790 13102853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13110742 13110823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13115586 13115657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13276262 13276400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3378 nt):
ATGGGGGACCCCAAGGCCCACGTGATGGCGCGCCCCCTGCGAGCCCCTCTCCGGAGGTCCTTTAGCGATC
ACATCAGGGACTCCACGGCCAGAGCCCTGGATGTCATTTGGAAAAACACTAGAGACAGACGGCTGGCAGA
AATTGAAGCCAAGGAAGCTTGTGATTGGCTACGGGCAACTGGTTTCCCCCAGTATGCACAGCTTTATGAA
GATTTCCTGTTCCCCATCGATATTTCCTTGGTCAAGAGAGAGCATGATTTTTTGGACAGAGATGCCATTG
AGGCTCTATGCAGGCGTCTAAATACTTTAAACAAATGTGCGGTGATGAAGCTAGAAATTAGTCCTCATCG
GAAACGAAGTGACGATTCAGACGAGGATGAGCCTTGTGCCATCAGTGGCAAATGGACTTTCCAAAGGGAC
AGCAAGAGGTGGTCCCGGCTTGAAGAGTTTGATGTCTTTTCTCCAAAACAAGACCTGGTCCCTGGGTCCC
CAGACGACTCCCACCCGAAGGACGGCCCCAGCCCCGGAGGCACGCTGATGGACCTCAGCGAGCGCCAGGA
GGTGTCTTCCGTCCGCAGCCTCAGCAGCACTGGCAGCCTCCCCAGCCACGCGCCCCCCAGCGAGGATGCT
GCCACCCCCCGGACTAACTCCGTCATCAGCGTTTGCTCCTCCAGCAACTTGGCAGGCAATGACGACTCTT
TCGGCAGCCTGCCCTCTCCCAAGGAACTGTCCAGCTTCAGCTTCAGCATGAAAGGCCACGAAAAAACTGC
CAAGTCCAAGACGCGCAGTCTGCTGAAACGGATGGAGAGCCTGAAGCTCAAGAGCTCCCATCACAGCAAG
CACAAAGCGCCCTCAAAGCTGGGGTTGATCATCAGCGGGCCCATCTTGCAAGAGGGGATGGATGAGGAGA
AGCTGAAGCAGCTCAACTGCGTGGAGATCTCCGCCCTCAATGGCAACCGCATCAACGTCCCCATGGTACG
AAAGAGGAGCGTTTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCGGAGACCAGCAGCGCGGTC
AGCACGCCCAGCCCTGTTACGAGGACCCGGAGCCTCAGTGCGTGCAACAAGCGGGTGGGCATGTACTTAG
AGGGCTTCGATCCTTTCAATCAGTCAACATTTAACAACGTGGTGGAGCAGAACTTTAAGAACCGCGAGAG
CTACCCAGAGGACACGGTGTTCTACATCCCTGAAGATCACAAGCCTGGCACTTTCCCCAAAGCTCTCACC
AATGGCAGTTTCTCCCCCTCGGGGAATAACGGCTCTGTGAACTGGAGGACGGGAAGCTTCCACGGCCCTG
GCCACATCAGCCTCAGGAGGGAAAACAGTAGCGACAGCCCCAAGGAACTGAAGAGACGCAATTCTTCCAG
CTCCATGAGCAGCCGCCTGAGCATCTACGACAACGTGCCGGGCTCCATCCTCTACTCCAGTTCAGGGGAC
CTGGCGGATCTGGAGAACGAGGACATCTTCCCCGAGCTGGACGACATCCTCTACCACGTGAAGGGGATGC
AGCGGATAGTCAATCAGTGGTCGGAGAAGTTTTCTGATGAGGGAGATTCGGACTCAGCCCTGGACTCGGT
CTCTCCCTGCCCGTCCTCTCCAAAACAGATACACCTGGATGTGGACAACGACCGAACCACACCCAGCGAC
CTGGACAGCACAGGCAACTCCCTGAATGAACCGGAAGAGCCCTCCGAGATCCCGGAAAGAAGGGATTCTG
GGGTTGGGGCTTCCCTAACCAGGTCCAACAGGCACCGACTGAGATGGCACAGTTTCCAGAGCTCACATCG
GCCAAGCCTCAACTCTGTATCACTACAGATTAACTGCCAGTCTGTGGCCCAGATGAACCTGCTGCAGAAA
TACTCACTCCTAAAGCTAACGGCCCTGCTGGAGAAATACACACCTTCTAACAAGCATGGTTTTAGCTGGG
CCGTGCCCAAGTTCATGAAGAGGATCAAGGTTCCAGACTACAAGGACCGGAGTGTGTTTGGGGTCCCACT
GACGGTCAACGTGCAGCGCACAGGACAACCGTTGCCTCAGAGCATCCAGCAGGCCATGCGATACCTCCGG
AACCATTGTTTGGATCAGGTTGGGCTCTTCAGAAAATCGGGGGTCAAGTCCCGGATTCAGGCTCTGCGCC
AGATGAATGAAGGTGCCATAGACTGTGTCAACTACGAAGGACAGTCTGCTTATGACGTGGCAGACATGCT
GAAGCAGTATTTTCGAGATCTTCCTGAGCCACTAATGACGAACAAACTCTCGGAAACCTTTCTACAGATC
TACCAATATGTGCCCAAGGACCAGCGCCTGCAGGCCATCAAGGCTGCCATCATGCTGCTGCCTGACGAGA
ACCGGGAGGTTCTGCAGACCCTGCTTTATTTCCTGAGCGATGTCACAGCAGCCGTAAAAGAAAACCAGAT
GACCCCAACCAACCTGGCCGTGTGCTTAGCGCCTTCCCTCTTCCATCTCAACACCCTGAAGAGAGAGAAT
TCCTCTCCCAGGGTAATGCAAAGAAAACAAAGTTTGGGCAAACCAGATCAGAAAGATTTGAATGAAAACC
TAGCTGCCACTCAAGGGCTGGCCCATATGATCGCCGAGTGCAAGAAGCTTTTCCAGGTTCCCGAGGAAAT
GAGCCGATGTCGTAATTCCTATACCGAACAAGAGCTGAAGCCCCTCACTCTGGAAGCACTCGGGCACCTG
GGTAATGATGACTCAGCTGACTACCAACACTTCCTCCAGGACTGTGTGGATGGCCTGTTTAAAGAAGTCA
AAGAGAAGTTTAAAGGCTGGGTCAGCTACTCCACTTCGGAGCAGGCTGAGCTGTCCTATAAGAAGGTGAG
CGAAGGACCCCCTCTGAGGCTTTGGAGGTCAGTCATTGAAGTCCCTGCTGTGCCAGAGGAAATCTTAAAG
CGCCTACTTAAAGAACAGCACCTCTGGGATGTAGACCTGTTGGATTCAAAAGTGATCGAAATTCTGGACA
GCCAAACTGAAATTTACCAGTATGTCCAAAACAGTATGGCACCTCATCCTGCTCGAGACTACGTTGTTTT
AAGAACCTGGAGGACTAATTTACCCAAAGGAGCCTGTGCCCTTTTACTAACCTCTGTGGATCACGATCGC
GCACCTGTGGTGGGTGTGAGGGTTAATGTGCTCTTGTCCAGGTATTTGATTGAACCCTGTGGGCCAGGAA
AATCCAAACTCACCTACATGTGCAGAGTTGACTTAAGGGGCCACATGCCAGAATGGTACACAAAATCTTT
TGGACATTTGTGTGCAGCTGAAGTTGTAAAGATCCGGGATTCCTTCAGTAACCAGAACACTGAAACCAAA
GACACCAAATCTAGGTGA

Translation (1125 aa):
MGDPKAHVMARPLRAPLRRSFSDHIRDSTARALDVIWKNTRDRRLAEIEAKEACDWLRATGFPQYAQLYE
DFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRD
SKRWSRLEEFDVFSPKQDLVPGSPDDSHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDA
ATPRTNSVISVCSSSNLAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSK
HKAPSKLGLIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSETSSAV
STPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDTVFYIPEDHKPGTFPKALT
NGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGD
LADLENEDIFPELDDILYHVKGMQRIVNQWSEKFSDEGDSDSALDSVSPCPSSPKQIHLDVDNDRTTPSD
LDSTGNSLNEPEEPSEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQK
YSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLR
NHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQI
YQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKREN
SSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEMSRCRNSYTEQELKPLTLEALGHL
GNDDSADYQHFLQDCVDGLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILK
RLLKEQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDR
APVVGVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETK
DTKSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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