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Report for CCDS82026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82026.1 Public Homo sapiens 16 CTU2 24 110 108 CCDS HistoryNCBI Gene:348180Re-query CCDS DB by CCDS ID:82026.1Re-query CCDS DB by GeneID:348180See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82026.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000567949.5 ENSP00000456908.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000567949.5Link to Ensembl Protein Viewer:ENSP00000456908.1Re-query CCDS DB by Nucleotide ID:ENST00000567949Re-query CCDS DB by Protein ID:ENSP00000456908
Original member Current member NCBI NM_001318507.2 NP_001305436.1 Accepted alive Link to Nucleotide Sequence:NM_001318507.2Link to Protein Sequence:NP_001305436.1Re-query CCDS DB by Nucleotide ID:NM_001318507Re-query CCDS DB by Protein ID:NP_001305436Link to BLAST:NP_001305436.1

Chromosomal Locations for CCDS 82026.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 88706531 88706598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88707136 88707210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88709938 88710016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88710223 88710282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88711635 88711695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88712061 88712383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88712622 88712905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88713312 88713447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88713647 88713778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714136 88714227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714383 88714486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714587 88714737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714860 88714926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88715048 88715106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88715182 88715251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGTGTCAGGTGGGCGAGGACTACGGGGAGCCGGCGCCTGAGGAGCCGCCCCCGGCGCCGCGGCCCAGCC
GTGAGCAGAAGTGTGTGAAGTGCAAGGAAGCGCAGCCCGTTGTGGTGATACGAGCCGGAGATGCCTTCTG
CAGGGACTGTTTCAAGGCCTTCTACGTCCACAAGTTCAGAGCCATGCTGGGCAAGAACCGGCTCATCTTT
CCAGGCGAGAAGGTGCTCTTGGCGTGGTCTGGGGGGCCTTCGTCCAGCTCCATGGTCTGGCAGGTTCTTG
AGGGCCTGAGCCAAGATTCTGCCAAAAGACTGCGCTTTGTGGCAGGAGTCATCTTTGTTGACGAACGAAC
TCCTGGGGTGTTGACTGTAGCGCTGAGGTCAGCCGCAAGAGAGAAACCCCTGCCCAAAGGAAAATGGCCG
ACACCCCACAGCTCCGCCAGGAAGCACCGCCCTGCGGAGCGAGGCCTCGAAGGGTTTTCCCAGGTGGAGG
TGGCCCTGCAGCCTGCCCTGCCTGGCTCCTCTCTGAGCCCTGACTCTTTCTGCCTGGGTTTTTCAGAGGG
AGCAGCCTGTGGCCAGAGCCTAGAGGAGAGATCAAAGACCCTGGCCGAAGTGAAGCCCATTCTGCAAGCA
ACTGGGTTCCCATGGCATGTGGTGGCCTTAGAGGAGGTGTTCAGCCTGCCACCGTCGGTGCTTTGGTGCT
CTGCCCAGGAGCTGGTGGGATCCGAGGGGGCCTACAAGGCGGCCGTGGACAGCTTCCTCCAGCAGCAGCA
TGTGCTGGGGGCCGGGGGTGGTCCTGGCCCGACTCAAGGGGAGGAACAGCCACCCCAGCCCCCGCTGGAC
CCCCAGAACCTGGCAAGACCGCCTGCCCCTGCCCAGACTGAGGCTCTTTCCCAACTGTTCTGCTCAGTGA
GGACACTGACTGCCAAGGAGGAGCTTCTGCAGACCCTGCGGACCCACCTGATCCTCCACATGGCCCGAGC
CCACGGCTACTCCAAGGTCATGACTGGGGACAGCTGCACACGCTTGGCTATCAAGCTCATGACCAACCTG
GCGCTGGGTCGAGGGGCCTTCCTGGCCTGGGATACGGGCTTCTCGGATGAGCGGCACGGGGACGTGGTGG
TGGTGCGGCCCATGCGGGACCACACCCTGAAGGAGGTCGCTTTCTACAACCGCCTGTTCTCCGTTCCTTC
TGTCTTCACACCAGCCGTCGACACCAAGGCCCCTGAAAAGGCCAGCATCCACCGGCTGATGGAGGCCTTC
ATCCTCAGGCTGCAGACCCAGTTCCCCTCCACTGTCAGCACTGTGTACAGGACAAGTGAGAAGCTGGTGA
AGGGCCCCCGGGATGGCCCTGCTGCTGGCGACTCCGGCCCCCGCTGCCTCCTCTGCATGTGTGCCCTGGA
CGTCGACGCCGCTGACAGTGCCACGGCTTTTGGGGCTCAGACCTCCTCGCGTCTCTCCCAGATGCAGTCA
CCCATCCCCCTGACTGAGACCCGGACACCCCCGGGGCCCTGCTGTTCTCCAGGGGTGGGCTGGGCCCAGC
GCTGTGGCCAGGGGGCCTGCAGGAGGGAGGACCCCCAAGCCTGCATTGAGGAGCAGCTGTGCTACAGCTG
CCGCGTGAACATGAAGGACTTGCCCTCACTGGACCCCCTGCCGCCGTACATCCTGGCTGAGGCCCAGCTC
CGCACACAGAGGGCCTGGGGCTTGCAGGAGATCCGGGACTGTCTGATTGAGGACAGTGACGACGAGGCGG
GCCAGAGCTGA

Translation (586 aa):
MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIF
PGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDERTPGVLTVALRSAAREKPLPKGKWP
TPHSSARKHRPAERGLEGFSQVEVALQPALPGSSLSPDSFCLGFSEGAACGQSLEERSKTLAEVKPILQA
TGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPPLD
PQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNL
ALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAF
ILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQS
PIPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLPSLDPLPPYILAEAQL
RTQRAWGLQEIRDCLIEDSDDEAGQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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