NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31052.1 Public Homo sapiens 1 URB2 24 110 108 CCDS HistoryNCBI Gene:9816Re-query CCDS DB by CCDS ID:31052.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258243.7 ENSP00000258243.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258243.7Link to Ensembl Protein Viewer:ENSP00000258243.2Re-query CCDS DB by Nucleotide ID:ENST00000258243Re-query CCDS DB by Protein ID:ENSP00000258243
Original member Current member NCBI NM_001314021.2 NP_001300950.1 Accepted alive Link to Nucleotide Sequence:NM_001314021.2Link to Protein Sequence:NP_001300950.1Re-query CCDS DB by Nucleotide ID:NM_001314021Re-query CCDS DB by Protein ID:NP_001300950Link to BLAST:NP_001300950.1
Original member Current member NCBI NM_014777.4 NP_055592.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014777.4Link to Protein Sequence:NP_055592.2Re-query CCDS DB by Nucleotide ID:NM_014777Re-query CCDS DB by Protein ID:NP_055592Link to BLAST:NP_055592.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001300950.1 1524 Q14146 1524 100% 0 0
NP_055592.2 1524 Q14146 1524 100% 0 0

Chromosomal Locations for CCDS 31052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 229627634 229627759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229632269 229632445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229634917 229638247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229643533 229643693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229645859 229645969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229647510 229647752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229651235 229651322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229654249 229654388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229659100 229659297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4575 nt):
ATGGCTGCTGTTTATTCTGGCATTTCCCTTAAGCTTAAAAGCAAGACAACTTCCTGGGAAGATAAACTAA
AACTAGCTCACTTTGCTTGGATTTCTCACCAGTGCTTTCTTCCAAATAAAGAACAAGTGTTACTTGATTG
GGCAAGACAATCATTGGTTGCATTTTATAAGAAAAAGCTTGAACTGAAGGAAGATATTGTTGAAAGGCTT
TGGATCTATATAGATAACATTTTACATAGCAGAAAATTGCAGAATCTCCTCAAGAATGGAAAGACCATTA
ATCTTCAGATTTCCCTAGTCAAGATCATCAATGAGAGAGTAGCTGAGTTCTCTCTTTCGGGATCCCAAAG
AAACATCTGTGCTGTCCTTCGATGTTGCCAGGGCATCCTGTCGACACCTGCCCTGGCTGTCATCTACACG
GCCAAACAGGAGCTGATGGTGGCCTTGCTGAGCCAGCTTTGCTGGTCGGCCTGCAGGCAGCCCGAAGGAG
CTGTGGTAGCCCAGTTGTTTGAGGTCATTCACCTGGCCCTTGGCCATTATCTCTTGATCCTGCAGCAGCA
GGTCAACCCAAGACGTGCCTTTGGGGATGTGACTGCTCACCTGCTCCAGCCGTGCCTGGTCCTGAGGCAC
TTACTCTCTGGGGGCACATGGACGCAGGCTGGCCAGGGCCAGCTGAGGCAGGTGCTGAGCCGGGACATCA
GGAGTCAGATTGAGGCCATGTTCCGAGGAGGGATTTTTCAGCCTGAGCTACTGTCATCCTACAAGGAGGG
GCTCTTGGACCAGCAGCAAGGGGATGTGAAGACGGGAGCCATGAAGAACCTTCTGGCTCCCATGGACACC
GTGCTTAACAGGCTGGTTGATGCTGGCTACTGTGCAGCATCCCTTCATACCTCTGTTGTGGCCAACTCAG
TGGCCTTGCTGTATAAGCTCTTTCTAGATTCTTACTTTAAGGAGGGAAACCAGCTTCTCTGCTTCCAGGT
TCTCCCCAGGTTGTTTGGCTGCTTGAAGATTTCACACCTGCAGGAGGAGCAGAGCAAAGCCCTGTCCACA
TCAGATTGGACCACAGAGCTTTTGGTTGTGGAACAGCTACTAAACTCAGTGGCCAACAACAATATCTACA
ACATCGCTGCCGACAGAATTCGGCACGAAGAGGCTCAGTTCCGCTTTTACCGCCACGTGGCTGAGCTGCT
GATAAACCATGCACAAGCACCCATACCGGCCTGGTTCCGCTGTCTGAAGACTTTGATATCTCTGAATCAT
TTGATTTTGGAGCCAGACCTGGATGACCTGCTGGCTTCAGCGTGGATCGATGCCGAGGTAACAGAGTTTC
GAACCAAAAAAGCCCAGGAGGCGCTTATTCGTACTGTCTTCCAGACTTATGCCAAACTCCGACAAGTGCC
ACGGTTGTTTGAAGAGGTTTTGGGGGTGATCTGTCGTCCAGCTGCTGAGGCACTGAGGCAGCCTGTGCTG
GCCTCGGGCCCCTCCACGGTACTCTCTGCATGCCTCCTGGAGCTGCCTCCAAGTCAGATCCTGGACACGT
GGTCCCTTGTGCTGGAGAAGTTCCAGTCTTTAGTCTTGCCCTATTTGCAGAGTGATGCCGACATGGCCCT
GAAATCACTGTCACTGAGCTTGCTGCTGCACTGCATCATGTTCAACATGAGGAGCCTGGACAGCAGCACG
CCTCTGCCCATTGTCAGACGGACACAGTGCATGATGGAGAGGATGATGAGGGAGCTCGTGCAGCCCCTGC
TGGCCCTTCTCCCGGACACCCCAGGCCCAGAGCCAGAGCTGTGGCTGCAGAAGGTCAGTGACTCTGTGCT
CCTGCTCTCTTACACTTGGGCCCAGGTGGACGCTATGTTCAGTTTGAACTGTAGCCAGTATCACTCTATG
TCTGGGCCCCTTATAGGTGTTGCTCTGGAGATCTCGAACCTCCCTTCGTTGCTCCCAGGTGTAAAAACAC
AGCATTGGAAGAAGATAGAGAAGTTTACAGCTCAGTTCAGCTCTCTTGGTACATATTGCTTAGAACAGCT
GTACCTGCAGAAAATGAAAAGGACTTTAATGCAAACTAGTTTCCGGTCTGAAGGAGCCATCCAAAGTTTG
AGGTGCGATGCTGCCTTTATTATTGGTTCCGGCAGAAAAAGCTTGAATCAGAGAACGACGGCTTCCTGGG
ATGGCCAAGTTGGGATGGTGAGTGGACTCACATACCCTGTAGCACACTGGCACTTGATTGTGTCAAATCT
CACAATTTTAATATCCTATCTGTGTCCAGATGATGTGGGATACCTGGCCAGTGTCCTGCTGAGAACTTTA
CCCATGGGCAAAGCCCAGGAAGTCTCAATAGATGAAGAGGCATACATCACACTGGAAAAAATATCCAAAG
CCTTCCTTCATAGCCCTCTCTTTCCAGAGATGCAGTCCCTTCATTCTGCTTTCTTAACGTGCGTAACCAC
AAGTTGCTCCAGCATTCTGTGTTCTGGTGCCCAGCGTGACTCAGGTCTTGTCAGTCAGCAGCTTCCCTGG
CTTTTTGAAAAGGACCACATGGTTGTGGGTCATTGGGAAAACAGATTTGCAAAAGCTGGACCCGAAGGTA
TAGAACCTAGAGGAGAAATTGCCCAGAACTTACTGTCCCTGGTCAAGAGTGACTTCCCTATCCAGCTGGA
GGGAGAGCAGTTGGAAAGCATCCTGGGGCTTTTGGAAGTGATTTCTGCCTTACAGCTGGACAGCCTCTTG
CCACCCTATCATGTGCATTATTTTCTTGTGTTACTGTCCATGGCCGTCACCAAACTAGGATGCTCTTGCT
CCTCCTCACTGGCTCTCAAGTTCTTGACGACTTGCTACCAACTTCTTGGTTACTTGCAAAAGGGGAAAAG
TGCTCGCTCTGTGTTCAAGATCATGTATGGTAGTGATATTTTTGAGGTTGTACTGACCTCATTGTTCAGA
GCTAGTAGTAGGTTCCTTATTGAGATGGATGATCCCGCTTGGCTGGAATTCCTCCAAGTGATAGGGACGT
TCTTAGAGGAGCTAATGCAGATGCTCATCCAAATGAAGCTGAGCTTGGTGCTCAATTTTAGAAAAATCAC
CGCATTCCTCTCTAGTTCCAAACCATACACGGAGGCAGCTTCAAGCAAACAATTAGAAAATCAGAACCCC
CAGGGCAGGCAGCTCCTTCTGGTGTCTTTAACCAGGTTGTGCCATGTCCTGGGACCTTTCCTCAAAGAGC
AGAAGCTGGGCCAAGAGGCCCCAGCAGCACTGTCTGAGCTGCTGCAGCAGGTTGTGCTGCAGACAGGAGC
TGTGCTGCAGCTCTGCTCAGTGCCGGGGGCCCGGGGCTGGCGCCTTCCCTCGGTCCTCATCTCATCCGTC
AGCACGCTCTTGGAAGCCGACCTGGGTCAGCACTGCAGGGATGGAGGGGCCGACATTTCCCAAGGAAGCG
ACAGGACGCTGCTCTCCCATGTTGCCCTCTACCAGGGTGTTTACTCTCAGATACTGTTGGAGTTGCCAGC
TCTCGCGGGACATGATCAGTCTTTTCAGGCAGCCTTGCAGTTTTTGACTCTGTTCTTTTTGGCCCCAGAA
CTGCATCCCAAAAAGGACTCCGTGTTTACCTCCATGTTTCATTCTGTGAGAAGAGTTCTTGCAGATCCTG
AAATTCCTGTTCAGGTCACTCAGGATATTGAGCCTCATTTGGGAGCCTTGTTCACCCAAATGTTAGAGGT
TGGGACGACAGAGGACTTGAGGCTGGTGATGCAGTGTATTCTCCAGGGACTGGATGTCAGTAACATGTGG
AAAGCAGATGTGCAGGCTGTTGTGTCAGCTGTTACACTGCTGAGGCTGCTACTGAACTGCCCACTCAGTG
GAGAGAAAGCAAGTCTGTTGTGGCGTGCGTGTCCCCAGATAGTCACAGCTTTAACACTCTTAAACCGAGA
AGCTTCTCAGGAGCAGCCTGTGTCCCTCACAGTGGTCGGGCCTGTCTTAGATGTCCTGGCTGCACTGCTG
CGGCAGGGGGAGGAGGCCATCGGCAACCCCCACCACGTCAGCCTGGCCTTCAGCATCCTTCTCACTGTCC
CTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTCTTCCCGAGGCTGCACAACGTGCTCTTCTCAAT
CCTGCAGTGTCACCCTAAGGTAATGCTGAAAGCCATCCCTTCTTTCTTGAACTCTTTCAATAGATTGGTG
TTTTCAGTTATGCGGGAAGGGCGGCAGAAGGACAAAGGAAGCATAGATGACCTGCCTACGGTCCTAAAGT
GTGCACGCCTGGTTGAAAGAATGTACAGCCACATCGCCGCACGAGCTGAGGAGTTTGCTGTGTTTTCCCC
ATTTATGGTGGCCCAGTACGTGTTGGAGGTACAGAAGGTGACCTTATATCCAGCTGTGAAAAGTCTGCTG
CAGGAGGGCATTTACCTCATCCTGGACCTCTGCATCGAGCCTGACGTCCAGTTCCTGCGGGCCTCGCTGC
AGCCGGGAATGAGAGACATCTTTAAGGAGCTCTATAATGACTATCTCAAGTACCACAAGGCCAAACATGA
AGGAGAGAAAAGATATACGGCCTAA

Translation (1524 aa):
MAAVYSGISLKLKSKTTSWEDKLKLAHFAWISHQCFLPNKEQVLLDWARQSLVAFYKKKLELKEDIVERL
WIYIDNILHSRKLQNLLKNGKTINLQISLVKIINERVAEFSLSGSQRNICAVLRCCQGILSTPALAVIYT
AKQELMVALLSQLCWSACRQPEGAVVAQLFEVIHLALGHYLLILQQQVNPRRAFGDVTAHLLQPCLVLRH
LLSGGTWTQAGQGQLRQVLSRDIRSQIEAMFRGGIFQPELLSSYKEGLLDQQQGDVKTGAMKNLLAPMDT
VLNRLVDAGYCAASLHTSVVANSVALLYKLFLDSYFKEGNQLLCFQVLPRLFGCLKISHLQEEQSKALST
SDWTTELLVVEQLLNSVANNNIYNIAADRIRHEEAQFRFYRHVAELLINHAQAPIPAWFRCLKTLISLNH
LILEPDLDDLLASAWIDAEVTEFRTKKAQEALIRTVFQTYAKLRQVPRLFEEVLGVICRPAAEALRQPVL
ASGPSTVLSACLLELPPSQILDTWSLVLEKFQSLVLPYLQSDADMALKSLSLSLLLHCIMFNMRSLDSST
PLPIVRRTQCMMERMMRELVQPLLALLPDTPGPEPELWLQKVSDSVLLLSYTWAQVDAMFSLNCSQYHSM
SGPLIGVALEISNLPSLLPGVKTQHWKKIEKFTAQFSSLGTYCLEQLYLQKMKRTLMQTSFRSEGAIQSL
RCDAAFIIGSGRKSLNQRTTASWDGQVGMVSGLTYPVAHWHLIVSNLTILISYLCPDDVGYLASVLLRTL
PMGKAQEVSIDEEAYITLEKISKAFLHSPLFPEMQSLHSAFLTCVTTSCSSILCSGAQRDSGLVSQQLPW
LFEKDHMVVGHWENRFAKAGPEGIEPRGEIAQNLLSLVKSDFPIQLEGEQLESILGLLEVISALQLDSLL
PPYHVHYFLVLLSMAVTKLGCSCSSSLALKFLTTCYQLLGYLQKGKSARSVFKIMYGSDIFEVVLTSLFR
ASSRFLIEMDDPAWLEFLQVIGTFLEELMQMLIQMKLSLVLNFRKITAFLSSSKPYTEAASSKQLENQNP
QGRQLLLVSLTRLCHVLGPFLKEQKLGQEAPAALSELLQQVVLQTGAVLQLCSVPGARGWRLPSVLISSV
STLLEADLGQHCRDGGADISQGSDRTLLSHVALYQGVYSQILLELPALAGHDQSFQAALQFLTLFFLAPE
LHPKKDSVFTSMFHSVRRVLADPEIPVQVTQDIEPHLGALFTQMLEVGTTEDLRLVMQCILQGLDVSNMW
KADVQAVVSAVTLLRLLLNCPLSGEKASLLWRACPQIVTALTLLNREASQEQPVSLTVVGPVLDVLAALL
RQGEEAIGNPHHVSLAFSILLTVPLDHLKPLEYGSVFPRLHNVLFSILQCHPKVMLKAIPSFLNSFNRLV
FSVMREGRQKDKGSIDDLPTVLKCARLVERMYSHIAARAEEFAVFSPFMVAQYVLEVQKVTLYPAVKSLL
QEGIYLILDLCIEPDVQFLRASLQPGMRDIFKELYNDYLKYHKAKHEGEKRYTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH