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Report for CCDS6988.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6988.1 Public Homo sapiens 9 PPP1R26 24 110 108 CCDS HistoryNCBI Gene:9858Re-query CCDS DB by CCDS ID:6988.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6988.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356818.7 ENSP00000349274.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356818.7Link to Ensembl Protein Viewer:ENSP00000349274.2Re-query CCDS DB by Nucleotide ID:ENST00000356818Re-query CCDS DB by Protein ID:ENSP00000349274
Original member Current member EBI ENST00000401470.3 ENSP00000385826.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401470.3Link to Ensembl Protein Viewer:ENSP00000385826.3Re-query CCDS DB by Nucleotide ID:ENST00000401470Re-query CCDS DB by Protein ID:ENSP00000385826
Original member Current member EBI ENST00000604351.5 ENSP00000473820.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000604351.5Link to Ensembl Protein Viewer:ENSP00000473820.1Re-query CCDS DB by Nucleotide ID:ENST00000604351Re-query CCDS DB by Protein ID:ENSP00000473820
Original member Current member EBI ENST00000605660.1 ENSP00000474794.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000605660.1Link to Ensembl Protein Viewer:ENSP00000474794.1Re-query CCDS DB by Nucleotide ID:ENST00000605660Re-query CCDS DB by Protein ID:ENSP00000474794
Original member Current member EBI ENST00000605286.5 ENSP00000474807.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000605286.5Link to Ensembl Protein Viewer:ENSP00000474807.1Re-query CCDS DB by Nucleotide ID:ENST00000605286Re-query CCDS DB by Protein ID:ENSP00000474807
Original member Current member NCBI NM_014811.5 NP_055626.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014811.5Link to Protein Sequence:NP_055626.3Re-query CCDS DB by Nucleotide ID:NM_014811Re-query CCDS DB by Protein ID:NP_055626Link to BLAST:NP_055626.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055626.3 1209 Q5T8A7 1209 100% 0 0

Chromosomal Locations for CCDS 6988.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 135484511 135488140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3630 nt):
ATGTTTCTCATGAACGCTTCTCCAGTGGTTGCTCTCCAGTCCAAATGGGAGGCCTTTGGCCCGCCAGGGA
GCTGTAGGTTCCCCAGGTGCTTCTCGGAGGCTGACGAGGGCGTGGAGAGCGCGTCGGTGAGCGCCCGGGT
GCAGATGCTTATCAGCACTCTGCAGCGCGACGGGGCTGCTCGGGGCACCAGCGATGAGCGCGCCGCACAG
AGGGGCCACAGGGCAGAGGGATGCCACGACGCCAGGCCGGCTGCCAAGCCCACCGTGCACAAGGAGCCAC
CCGCGTTGGCTGTCTGTGGTCTCGTTGCTGACTTTGACCCCATGGGGGAGGAGGAAACTACAGACTTTGG
CCCGTTGGTGCTAGATTCAGACAGTGATGATTCCGTGGACAGGGACATTGAGGAGGCCATCCAGGAGTAC
CTGAAGGCAAAGAGTGGAGCCGCACAGCCCGGGGCCGGCGGGGCCCAGCCAGGTGCAGCCCAGCCTTCCA
GGGCCGCAGGCGGAGGCAGTAGATGTAAGCCGGAACCGGCTCACGGCAGTGCCCCGACTGCCCTGTGTCC
CCCAAAACTTGTACCTGGATCAGGTGGTGGCCCCGGCAGCCAGGTGGGATCCAGCAAGGACCAGGGCTCC
GCCTCCCCGGTCAGTGTGAGCAGCGATGACTCCTTCGAGCAGAGCATCAGGGCGGAAATAGAACAGTTTC
TGAATGAGAAGAGACAGCATGAGACCCAAAAATGTGATGGGTCAGTGGAGAAGAAACCAGACACAAATGA
AAATTCCGCCAAGTCACTCTTGAAATCCCACCAAGAGCCGCCTACAAAGGTGGTGCATCGGCAGGGCCTG
CTGGGCGTCCAGAAGGAGTTTGCCTTCCGCAAACCTCCCCGGTTAGCGAAGATGAACGTCCAGCCCAGAA
GCCTCAGGTCCAAGGTCACAACCACGCAGGAGAACGAGGGCAGCACGAAGCCGGCAACCCCCTGCCGCCC
TTCAGAAGCAGCACAGAATAAAGGTGGGATCAAAAGGAGCGCCAGCGCTGCAAGGAGGGGAAAGCGAGTC
ATGAGTGCGGCACAGGCGTCCGAGGCGTCCGACTCCAGCAGCGACGATGGCATTGAGGAGGCCATCCAGC
TGTACCAGCTGCAGAAAACACGCAAGGAGGCCGACGGGGACCTGCCCCAGAGGGTCCAACTCCGAGAGGA
GAGAGCGCCTGACCCTCCCGCACACAGCACAAGCAGTGCCACAAAAAGTGCCTTGCCCGAGACCCACAGG
AAAACACCCAGCAAGAAGAAGCTAGTGGCCACCAAGACCATGGACCCTGGTCCAGGGGGCCTGGACACTG
ACCATGCCCCCAAGCTCCTGAAGGAAACCAAAGCTCCACCTCCAGCGAGCCCTGCTTCCAGGAGTGAGTT
TGTGGAACGGTCCTCGTGCCGGGCGGACACATCTGCTGAGCTGATGTGTGCAGAAGCAATCCTGGACATC
TCCAAGACGATCCTGCCGGCCCCTGTAGAGGGCAGTGACGGGTCCCTGTCCGCAAGCCCACTCTTCTACT
CCCCGAACGTGCCTTCCCGCTCTGACGGCGACAGTAGCTCCGTGGACAGCGATGACAGCATCGAGCAGGA
AATCCGGACATTTTTGGCCCTAAAGGCGCAGTCAGGGAGTTTGCTGGCCAGAGGTGAGAGCTGCCCGCAG
GCTGCCCAGGGTCCACTTTTGCCGCCTGGCCTCAACAGCCAGACCGGCGGCCACAAGACCCCTCTCTCTA
AAACACCAGACCCACTGCTGGGCTGCAAAAGGAAGCGTAGAGGTGGTGGCCATGTGAGGCCATCCACGCC
CAAGAAAATGCAGGAGGTGGTGAAAGACGGTAGCCAGGATGCCGACCACAGCCAGGGGAGAGCTGAGCCC
GGCCATGAGAGGCGAGACCTGCCCATCCAGGGCAAAGCCAGTGAGGCCCTGGGAGGGGAGGGCACCGCCA
GGGGCCCTGGCGACACTCGCATGTCACAGGGCCAGGGTAAGACAGACGAGGCAAGGCGCCTAGACGAGAA
AGAGAGCTCTGAAGACAAAAGCAGCTCCCTGGACAGTGACGAGGACCTGGACACAGCCATCAAGGACTTG
TTAAGGTCCAAGCGAAAGCTCAAGAAGAGGTGCAGGGAGCCCAGGGCTGCGTGCAGGAAGAAGGTCAGGT
TCAGCACAGCCCAGACGCACTTCTTGGAGCAGCTGGGCGGGCTCCGGAGAGACTGGAAAGACAGGGGCCC
GCCAGTGCTGAAGAGCTGCCTCTCCAAGTCCAAGAGAGACAGTGGCGAGGGTCCTGGGAAGAAACCCCCC
AGTGTCTTTGGCAGCACGGCAGAGAGGATGAGGCAGGAGGGTGCCGCGAGCCAGGACGCGGCCCTGGCCT
TCCGGGTGAGGAGACCCGCCTCCGCCTCTGCCTCCGAAGGGAATCCATTCCCCAGGGAGTCCCAGGGCCC
AGCTCCCAGCCCCGGCTCCCTGTCTGATGACAGCAGTTCAGTGGACAGCAACGACAGCATCGAACTGGAG
ATTAGGAAGTTTTTGGCGGAAAAGGCCAAGGAGTCAGTGAGCAGTTCAGAAGTTCAGGCAGAGGGCCCCA
CCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGTGCAGGAAGGAGCCTGCCCCACCGCCTGG
CGTGTGCACACGCAGCCAGAGGGCCAGGGGGGTCCCACATCTGGCCGAAGGGCTTCGAGGCACAGAGAGC
GCAGGAGCACAGGGCACAGCTGGTCTGTTCAGCCAGGGCGGGAAGGGGCTCCCTGCTGCTCCTGCCCGAG
GGGATCCGGTGCCGCCCAGGAGCACCAGCGGCGGTGTCTCCGCCAAGGGGCTCTCAGTGAGCAGGAGAAA
TGTTTACGTTCACAAAGACCAGAGCCCACGAGGGGCTGAGCCTGCTGCCAAAAGTGCTTTTGGTCAGCTG
CCCAGCTGTGCCACAGCGGGCACCGAGGCAGGAGGCGCCAGAGGAACCTTTCACATGGGCTGCGGGAGCC
CGAGCTTCCTGACCCCCAGCCCGGGAGCGGAGAGGGACGCTGGAGCCCAGGCCGACCGCACACCGCCCTG
GAGCGACTTCGCCCACCAGAGTCGGCTGCCCAGCCCGTGGGTGCTGCGCTCCGAAGGCAGAGATGCAGTG
TGGAGGGGGGGCGTCGGGAGCGAGAGAGACAAGGGGTCCGAGGGCCCCGCCCGGGGCCTGCCCAGCCTGC
CCCTTGCGGGCTTCTCGCCGCTGCTGTCCACCCAGCTCTTCCACTTTGGAAAGGGTGTCTCCTGGGGGGG
CAGGCAGGCTGGCCTCTTCAGCCCCCACCTGGGGCTGCCTCTGCAGGGCCCCTCCTTCTCGGCCTTCAGG
GAGGCCCAGGCCGGACCCAGCCCTGTCTTTGGAAGCCCACACTTGCTGGCAAAGAAGGACGGCGGCCCCT
GGCCAACCAGGAAGGCACAGGCAGGGCTGAGTTTGCATGACAGGAGGAGCTCGGGCTCGGAGGAAAGCAT
TTTAGACCTGAGGTATCGACGAAGGGTCAACAGGGATGACCAGGAGCAGGACGCCTTGGGCAGTGACGCC
AGTGACTTCAGCGACACCTCCACGGAGGACAGTGGCGGCAGCTCAGTAGTGAAGGTCTAA

Translation (1209 aa):
MFLMNASPVVALQSKWEAFGPPGSCRFPRCFSEADEGVESASVSARVQMLISTLQRDGAARGTSDERAAQ
RGHRAEGCHDARPAAKPTVHKEPPALAVCGLVADFDPMGEEETTDFGPLVLDSDSDDSVDRDIEEAIQEY
LKAKSGAAQPGAGGAQPGAAQPSRAAGGGSRCKPEPAHGSAPTALCPPKLVPGSGGGPGSQVGSSKDQGS
ASPVSVSSDDSFEQSIRAEIEQFLNEKRQHETQKCDGSVEKKPDTNENSAKSLLKSHQEPPTKVVHRQGL
LGVQKEFAFRKPPRLAKMNVQPRSLRSKVTTTQENEGSTKPATPCRPSEAAQNKGGIKRSASAARRGKRV
MSAAQASEASDSSSDDGIEEAIQLYQLQKTRKEADGDLPQRVQLREERAPDPPAHSTSSATKSALPETHR
KTPSKKKLVATKTMDPGPGGLDTDHAPKLLKETKAPPPASPASRSEFVERSSCRADTSAELMCAEAILDI
SKTILPAPVEGSDGSLSASPLFYSPNVPSRSDGDSSSVDSDDSIEQEIRTFLALKAQSGSLLARGESCPQ
AAQGPLLPPGLNSQTGGHKTPLSKTPDPLLGCKRKRRGGGHVRPSTPKKMQEVVKDGSQDADHSQGRAEP
GHERRDLPIQGKASEALGGEGTARGPGDTRMSQGQGKTDEARRLDEKESSEDKSSSLDSDEDLDTAIKDL
LRSKRKLKKRCREPRAACRKKVRFSTAQTHFLEQLGGLRRDWKDRGPPVLKSCLSKSKRDSGEGPGKKPP
SVFGSTAERMRQEGAASQDAALAFRVRRPASASASEGNPFPRESQGPAPSPGSLSDDSSSVDSNDSIELE
IRKFLAEKAKESVSSSEVQAEGPTALGTGGPARPEVLCRKEPAPPPGVCTRSQRARGVPHLAEGLRGTES
AGAQGTAGLFSQGGKGLPAAPARGDPVPPRSTSGGVSAKGLSVSRRNVYVHKDQSPRGAEPAAKSAFGQL
PSCATAGTEAGGARGTFHMGCGSPSFLTPSPGAERDAGAQADRTPPWSDFAHQSRLPSPWVLRSEGRDAV
WRGGVGSERDKGSEGPARGLPSLPLAGFSPLLSTQLFHFGKGVSWGGRQAGLFSPHLGLPLQGPSFSAFR
EAQAGPSPVFGSPHLLAKKDGGPWPTRKAQAGLSLHDRRSSGSEESILDLRYRRRVNRDDQEQDALGSDA
SDFSDTSTEDSGGSSVVKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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