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Report for CCDS10013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10013.1 Public Homo sapiens 15 MKRN3 24 110 108 CCDS HistoryNCBI Gene:7681Re-query CCDS DB by CCDS ID:10013.1Re-query CCDS DB by GeneID:7681See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10013.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314520.6 ENSP00000313881.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314520.6Link to Ensembl Protein Viewer:ENSP00000313881.3Re-query CCDS DB by Nucleotide ID:ENST00000314520Re-query CCDS DB by Protein ID:ENSP00000313881
Original member Current member NCBI NM_005664.4 NP_005655.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005664.4Link to Protein Sequence:NP_005655.1Re-query CCDS DB by Nucleotide ID:NM_005664Re-query CCDS DB by Protein ID:NP_005655Link to BLAST:NP_005655.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005655.1 507 Q13064 507 100% 0 0

Chromosomal Locations for CCDS 10013.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 23565783 23567306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGAAGAGCCTGCAGCTCCCTCAGAAGCCCACGAGGCAGCCGGGGCCCAGGCAGGTGCTGAGGCAGCAA
GGGAGGGTGTGTCTGGGCCGGACCTTCCCGTCTGTGAGCCCTCCGGGGAATCTGCTGCTCCAGATTCAGC
CCTGCCACATGCGGCAAGGGGCTGGGCCCCCTTCCCTGTAGCTCCAGTCCCTGCCCACCTCCGCAGAGGA
GGCCTGAGGCCTGCCCCAGCCTCAGGAGGAGGAGCCTGGCCCAGTCCGTTGCCAAGCCGAAGCAGCGGCA
TTTGGACAAAGCAGATCATCTGCAGGTATTATATACATGGGCAGTGCAAGGAGGGGGAGAACTGTCGCTA
TTCGCACGACCTTTCTGGTCGGAAGATGGCCACTGAGGGTGGCGTTTCGCCGCCTGGGGCCTCTGCAGGT
GGAGGCCCTAGCACGGCTGCGCACATCGAGCCCCCGACTCAGGAAGTGGCGGAAGCCCCCCCGGCTGCAT
CCTCCCTTTCCTTGCCTGTGATTGGCTCGGCTGCTGAAAGGGGTTTCTTTGAAGCCGAGAGAGACAATGC
AGACCGTGGAGCTGCTGGAGGAGCAGGTGTAGAAAGCTGGGCGGATGCCATTGAGTTTGTTCCAGGGCAG
CCCTACCGGGGCCGCTGGGTTGCATCTGCCCCCGAGGCTCCTCTACAGAGCTCAGAGACTGAGAGGAAGC
AGATGGCTGTGGGCAGTGGGTTGCGGTTTTGCTATTATGCTTCCAGGGGAGTTTGCTTTCGTGGGGAGAG
CTGTATGTACCTCCATGGAGACATATGCGACATGTGTGGGCTGCAGACCTTGCACCCCATGGATGCTGCC
CAGAGGGAAGAACATATGAGGGCCTGCATTGAAGCACACGAGAAAGATATGGAACTCTCGTTTGCTGTGC
AGCGTGGTATGGACAAGGTGTGTGGCATCTGCATGGAGGTTGTCTATGAGAAGGCCAACCCCAATGACCG
CCGCTTTGGCATTCTTTCCAATTGCAACCATTCCTTCTGTATTAGGTGTATCCGCAGGTGGAGAAGTGCC
AGACAGTTTGAGAACAGGATCGTCAAGTCTTGCCCACAGTGCAGGGTCACCTCTGAATTGGTCATTCCCA
GTGAGTTCTGGGTGGAGGAGGAGGAAGAGAAGCAGAAACTTATTCAGCAATACAAGGAGGCAATGAGCAA
CAAGGCCTGCAGGTATTTTGCGGAAGGCAGGGGTAACTGCCCATTTGGAGACACATGCTTTTACAAGCAT
GAATACCCTGAGGGCTGGGGAGATGAGCCTCCTGGGCCAGGTGGTGGGTCATTCAGCGCATACTGGCATC
AACTTGTGGAGCCTGTGCGAATGGGAGAGGGCAACATGCTCTATAAAAGCATTAAGAAGGAGCTTGTCGT
GCTTCGGCTGGCCAGTCTGTTGTTTAAGCGGTTTCTTTCACTGAGAGATGAGTTACCCTTCTCTGAGGAC
CAGTGGGACTTGCTTCATTATGAGCTGGAAGAATATTTCAATTTGATTCTGTAG

Translation (507 aa):
MEEPAAPSEAHEAAGAQAGAEAAREGVSGPDLPVCEPSGESAAPDSALPHAARGWAPFPVAPVPAHLRRG
GLRPAPASGGGAWPSPLPSRSSGIWTKQIICRYYIHGQCKEGENCRYSHDLSGRKMATEGGVSPPGASAG
GGPSTAAHIEPPTQEVAEAPPAASSLSLPVIGSAAERGFFEAERDNADRGAAGGAGVESWADAIEFVPGQ
PYRGRWVASAPEAPLQSSETERKQMAVGSGLRFCYYASRGVCFRGESCMYLHGDICDMCGLQTLHPMDAA
QREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPNDRRFGILSNCNHSFCIRCIRRWRSA
RQFENRIVKSCPQCRVTSELVIPSEFWVEEEEEKQKLIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKH
EYPEGWGDEPPGPGGGSFSAYWHQLVEPVRMGEGNMLYKSIKKELVVLRLASLLFKRFLSLRDELPFSED
QWDLLHYELEEYFNLIL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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