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Report for CCDS10105.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10105.1 Public Homo sapiens 15 MFAP1 24 110 108 CCDS HistoryNCBI Gene:4236Re-query CCDS DB by CCDS ID:10105.1Re-query CCDS DB by GeneID:4236See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10105.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267812.4 ENSP00000267812.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267812.4Link to Ensembl Protein Viewer:ENSP00000267812.3Re-query CCDS DB by Nucleotide ID:ENST00000267812Re-query CCDS DB by Protein ID:ENSP00000267812
Original member Current member NCBI NM_005926.3 NP_005917.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005926.3Link to Protein Sequence:NP_005917.2Re-query CCDS DB by Nucleotide ID:NM_005926Re-query CCDS DB by Protein ID:NP_005917Link to BLAST:NP_005917.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005917.2 439 P55081 439 100% 0 0

Chromosomal Locations for CCDS 10105.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43805094 43805276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43805376 43805465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43809755 43809914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43812987 43813147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43813249 43813357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43814501 43814688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43814945 43815074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43817229 43817448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43824491 43824569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGTCGGTCCCAAGCGCTCTCATGAAGCAACCGCCCATTCAGTCTACGGCTGGGGCCGTCCCAGTTCGCA
ATGAGAAAGGTGAGATTTCAATGGAAAAAGTGAAGGTAAAGCGTTATGTGTCCGGAAAAAGGCCAGACTA
TGCCCCTATGGAGTCCTCAGATGAGGAGGATGAAGAATTTCAGTTCATTAAGAAAGCCAAAGAACAAGAA
GCAGAGCCTGAGGAACAGGAGGAGGATTCATCCAGTGACCCCCGGCTACGGCGTTTACAGAACCGTATTA
GTGAAGATGTGGAAGAGAGATTGGCTCGACATCGAAAAATAGTGGAACCTGAAGTGGTAGGAGAGAGTGA
CTCAGAAGTAGAAGGAGATGCTTGGCGCATGGAACGAGAAGACAGCAGTGAAGAAGAGGAGGAGGAAATT
GATGATGAGGAAATAGAGCGGCGGCGTGGCATGATGCGTCAGCGAGCACAGGAGAGAAAAAATGAAGAGA
TGGAAGTCATGGAAGTGGAAGATGAGGGTCGTTCTGGAGAGGAGTCAGAATCAGAGTCTGAGTATGAAGA
GTACACAGACAGTGAAGATGAGATGGAGCCTCGCCTTAAGCCAGTCTTCATTCGAAAGAAGGACCGAGTG
ACAGTTCAAGAACGTGAAGCCGAAGCATTGAAACAGAAGGAGCTGGAGCAGGAAGCAAAACGCATGGCTG
AGGAAAGGCGCAAGTACACACTCAAGATTGTCGAAGAGGAAACCAAAAAAGAGCTGGAAGAGAACAAGCG
ATCCCTGGCTGCATTGGATGCACTCAATACTGATGATGAAAATGATGAGGAGGAATATGAGGCATGGAAA
GTTCGAGAGCTAAAAAGAATCAAGAGGGACAGAGAAGATCGAGAAGCGCTTGAGAAGGAGAAAGCAGAAA
TTGAACGCATGCGAAACCTGACTGAGGAAGAGAGGAGAGCTGAACTTCGGGCAAACGGCAAAGTCATTAC
CAACAAAGCTGTTAAGGGCAAATACAAGTTCTTACAGAAGTATTATCACCGGGGTGCCTTCTTCATGGAT
GAGGATGAAGAAGTATACAAGAGAGATTTCAGCGCTCCTACCCTGGAGGATCATTTCAATAAAACCATTC
TTCCTAAAGTCATGCAGGTCAAGAACTTTGGACGCTCAGGTCGCACCAAATACACTCACCTTGTGGATCA
AGATACCACCTCCTTTGACTCAGCTTGGGGCCAAGAGAGTGCCCAGAACACAAAGTTCTTCAAACAAAAG
GCAGCTGGGGTACGAGATGTATTTGAGCGGCCATCTGCCAAGAAGCGGAAAACTACCTAG

Translation (439 aa):
MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQE
AEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDSSEEEEEEI
DDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRV
TVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWK
VRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMD
EDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQK
AAGVRDVFERPSAKKRKTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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