NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10201.1 Public Homo sapiens 15 PDCD7 24 110 108 CCDS HistoryNCBI Gene:10081Re-query CCDS DB by CCDS ID:10201.1Re-query CCDS DB by GeneID:10081See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10201.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000204549.9 ENSP00000204549.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000204549.9Link to Ensembl Protein Viewer:ENSP00000204549.4Re-query CCDS DB by Nucleotide ID:ENST00000204549Re-query CCDS DB by Protein ID:ENSP00000204549
Original member Current member NCBI NM_005707.2 NP_005698.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005707.2Link to Protein Sequence:NP_005698.1Re-query CCDS DB by Nucleotide ID:NM_005707Re-query CCDS DB by Protein ID:NP_005698Link to BLAST:NP_005698.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005698.1 485 Q8N8D1 485 100% 0 0

Chromosomal Locations for CCDS 10201.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65118717 65118840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65119376 65119463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65119718 65119954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65129032 65129170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65132912 65133781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGGCCCTGCCACCATTCTTCGGCCAGGGTCGCCCAGGCCCACCGCCCCCGCAGCCGCCGCCTCCTGCTC
CTTTCGGCTGTCCGCCACCGCCGCTGCCCTCCCCGGCTTTCCCGCCGCCTCTCCCCCAGCGGCCCGGCCC
TTTTCCGGGGGCCTCCGCCCCCTTCCTTCAGCCTCCGCTGGCTCTGCAGCCCCGAGCCTCCGCGGAGGCC
TCCCGCGGCGGAGGCGGCGCTGGCGCCTTCTACCCGGTGCCACCACCGCCGCTGCCTCCTCCGCCGCCCC
AGTGTCGGCCCTTCCCGGGGACCGACGCCGGCGAGCGGCCGCGGCCACCGCCTCCCGGCCCGGGGCCGCC
CTGGAGCCCGCGGTGGCCTGAGGCGCCGCCGCCGCCGGCCGACGTGCTCGGGGATGCGGCCCTCCAACGC
CTGCGCGACCGGCAGTGGCTGGAGGCGGTGTTCGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGC
GCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATTGCTCCGGGCTCTGCGCCTGGTGCGGCG
GCTGCGCGGCCTGAGCCAGGCCCTGCGCGAGGCCGAAGCCGACGGCGCGGCCTGGGTCCTGCTGTACTCC
CAGACCGCGCCGCTGCGCGCGGAACTGGCCGAGCGGCTACAGCCGTTGACCCAGGCTGCCTATGTGGGCG
AGGCGCGGAGGAGGCTGGAGAGGGTCCGGCGCCGCCGGCTGCGGCTTCGCGAGAGGGCCCGGGAACGCGA
GGCCGAGCGGGAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAGGAGATTGACCGCTGGAGGGTGAAG
TGTGTGCAGGAGGTGGAGGAGAAGAAGCGGGAGCAGGAACTCAAAGCAGCCGCTGATGGCGTACTATCTG
AAGTGAGGAAAAAACAAGCAGATACCAAAAGAATGGTGGACATTCTACGGGCTTTGGAGAAATTGAGGAA
ACTGAGGAAAGAGGCTGCAGCGAGGAAAGGGGTCTGTCCTCCAGCCTCAGCAGATGAGACTTTTACGCAT
CATCTTCAGCGACTGAGAAAACTCATTAAAAAGCGCTCTGAACTGTATGAAGCTGAAGAGAGAGCCCTCA
GAGTTATGCTAGAAGGAGAACAAGAGGAAGAGAGGAAAAGAGAATTAGAAAAGAAACAAAGAAAAGAAAA
AGAGAAAATTTTACTTCAGAAACGTGAAATTGAGTCCAAGTTGTTTGGGGATCCAGATGAGTTCCCACTT
GCTCACCTCTTGGAGCCTTTCCGACAGTATTATCTCCAAGCCGAGCACTCCCTGCCAGCGCTCATCCAGA
TCAGGCATGATTGGGATCAGTACCTGGTGCCATCCGATCATCCCAAAGGCAACTTCGTTCCCCAAGGATG
GGTCCTTCCCCCGCTCCCCAGCAACGACATCTGGGCAACTGCTGTTAAGCTGCATTAG

Translation (485 aa):
MALPPFFGQGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASAEA
SRGGGGAGAFYPVPPPPLPPPPPQCRPFPGTDAGERPRPPPPGPGPPWSPRWPEAPPPPADVLGDAALQR
LRDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVRARLLRALRLVRRLRGLSQALREAEADGAAWVLLYS
QTAPLRAELAERLQPLTQAAYVGEARRRLERVRRRRLRLRERAREREAEREAEAARAVEREQEIDRWRVK
CVQEVEEKKREQELKAAADGVLSEVRKKQADTKRMVDILRALEKLRKLRKEAAARKGVCPPASADETFTH
HLQRLRKLIKKRSELYEAEERALRVMLEGEQEEERKRELEKKQRKEKEKILLQKREIESKLFGDPDEFPL
AHLLEPFRQYYLQAEHSLPALIQIRHDWDQYLVPSDHPKGNFVPQGWVLPPLPSNDIWATAVKLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH