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Report for CCDS10245.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10245.2 Public Homo sapiens 15 GOLGA6B 24 110 108 CCDS HistoryNCBI Gene:55889Re-query CCDS DB by CCDS ID:10245.2Re-query CCDS DB by GeneID:55889See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 10245.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421285.4 ENSP00000408132.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421285.4Link to Ensembl Protein Viewer:ENSP00000408132.3Re-query CCDS DB by Nucleotide ID:ENST00000421285Re-query CCDS DB by Protein ID:ENSP00000408132
Original member Current member NCBI NM_018652.5 NP_061122.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018652.5Link to Protein Sequence:NP_061122.4Re-query CCDS DB by Nucleotide ID:NM_018652Re-query CCDS DB by Protein ID:NP_061122Link to BLAST:NP_061122.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061122.4 693 A6NDN3 693 100% 0 0

Chromosomal Locations for CCDS 10245.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 72654738 72654821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72656512 72656631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72658558 72658638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72659494 72659532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72659794 72659844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72659945 72660026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72660123 72660229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72661264 72661350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72661459 72661566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72661759 72661846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72662252 72662760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72663037 72663105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72664436 72664511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72664944 72665035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72665596 72665698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72665782 72665885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72665975 72666128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72666215 72666342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2082 nt):
ATGTGGCCCCAACCCTACCTCCCTCCCCACCCCATGATGTTAGAAGAATCTCGACAGAATAAATTGGCAG
CAGCCAAGAAAAAGCTAAAAGAATATCAGCAAAGGAAGAGCCCTGGTATTCCAGCAGGAGCAAAGACAAA
AAAGAAAAAAACTGACAGTAGCCCTGAGACAACCACTTCCGGTGGTGGCCACTCACCTGGGGATAGCCAG
TACCAAGAACTAGCAGTAGCCCTGGAGTCAAGCTCAGTGACAATCAGTCAACTCAATGAAAACATAGAAT
CATTGAAACAGCAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGCAAAGAAAACAAACAATGAAATACA
CAAAGCACAAATGGAGCGGTTAGAGACAATCAACATCCTCACATTGGAAAAGGCAGACTTGAAGACCACC
CTTTACCATACTAAACGTGCTGCCCGACACTTCGAAGAAGAGTCCAAGGATCTGGCTGGCCGCCTGCAAT
ACTCCTTACAGCGTATTCAAGAATTGGAGCGGGCTCTCTGTGCTGTGTCTACACAGCAGCAGGAAGAGGA
CAGGTCCTCGAGCTGCAGAGAAGCGGTCCTCCACCGGCGGTTACAGCAGACCATAAAGGAGCGGGCGCTG
CTGAACGCACACGTGACACAGGTGACAGAGTCACTAAAACAAGTCCAGCTAGAGCGAGACGAATATGCTA
AACACATAAAAGGAGAGAGGGCCCGGTGGCAGGAGAGGATGTGGAAAATGTCGGTGGAGGCTCGAACATT
GAAGGAAGAGAAGAAGCGTGACATACATCGGATACAGGAGCTGGAGAGGAGCTTGTCCGAACTCAAAAAC
CAGATGGCTAAGCCCCCATCCCTGGCGCCCCCAGCAGTGACCTCTGTGGTGGAACAGCTACAAGATGAGG
CCAAACACCTGAGGCAGGAGGTGGAAGGTCTGGAGGGAAAGCTCCAATCCCAGGTGGAAAACAATCAGGC
CTTGAGTCTCCTTAGCAAGGAACAAAAGCAGAGACTCCAGGAGCAGGAGGAGATGCTCCGAGAGCAGGAG
GTGCAGAGAGTGCGGGAGCAGGAGAGACTGTGTGAACAAAACGAGAGGCTTCGGGAGCAGCAGAAGACGC
TACAGGAGCAGGGTGAGAGGCTGCGAAAGCAGGAGCAGAGGCTACGCAAACAGGAGGAGAGGCTGCGAAA
GGAGGAGGAGAGGCTGCAAAAGCAGGAAAAGAGGCTGTGGGACCAGGAGGAGAGGCTGTGGAAGAAGGAG
GAGAGGCTACAAAAGCAGGAGGAGAGGCTCGCGCTCTCCCAGAACCACAAGCTCGACAAGCAGCTGGCCG
AGCCACAGTGCAGCTTCGAGGATCTGAACAACGAGAAAAAGAGCGCACTGCAGTTGGAGCAGCAAGTAAA
GGAGCTGCAGGAGAAGCTAGACGAGGAGCACCTAGAAGCTGCCAGCCAGCAGAACCAACAGCTAGAGACC
CAGCTAAGCCTCGTGGCTCTCCCGGGAGAAGGAGATGGAGGACAACATCTGGACAGTGAGGAGGAGGAGG
CGCCTCGGCCCACGCCAAACATCCCAGAGGACCTGGAGAGCCGGGAGGCCACGAGCAGCTTTATGGACCT
CCCGAAGGAGAAGGCGGACGGGACGGAGCAGGTGGAGAGACGAGAGCTTGGATTCGTCCAGCCTTCTGGA
GTGACAGACGGCATGAGAGAGTCCTTCACCGTATATGAAAGCCAGGGGGCAGTGCCAAACACGCGGCACC
AGGAGATGGAGGATGTCATCAGGCTGGCCCAGAAGGAGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCA
AGAGTTGGTGTTGCCCCTTGTGGGCAACCATGAGGGGCATGGCAAATTCCTCATCGCTGCCCAGAACCCT
GCTGATGAGCCCACTCCAGGGGCCCCAGCCCCCCAGGAACTTGGGGCTGCCGGTGAGCAGGATGATTTTT
ATGAAGTGAGCCTGGACAACAACGTGGAGCCTGCACCAGGAGCGGCCAGGGAGGGTTCTCCCCATGACAA
CCCCACTGTACAGCAGATCGTGCAGCTGTCTCCTGTCATGCAGGACACCTAG

Translation (693 aa):
MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDSSPETTTSGGGHSPGDSQ
YQELAVALESSSVTISQLNENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMERLETINILTLEKADLKTT
LYHTKRAARHFEEESKDLAGRLQYSLQRIQELERALCAVSTQQQEEDRSSSCREAVLHRRLQQTIKERAL
LNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLSELKN
QMAKPPSLAPPAVTSVVEQLQDEAKHLRQEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQE
VQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKE
ERLQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQQNQQLET
QLSLVALPGEGDGGQHLDSEEEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQVERRELGFVQPSG
VTDGMRESFTVYESQGAVPNTRHQEMEDVIRLAQKEEEMKVKLLELQELVLPLVGNHEGHGKFLIAAQNP
ADEPTPGAPAPQELGAAGEQDDFYEVSLDNNVEPAPGAAREGSPHDNPTVQQIVQLSPVMQDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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