NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10579.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10579.1 Public Homo sapiens 16 CCP110 24 110 108 CCDS HistoryNCBI Gene:9738Re-query CCDS DB by CCDS ID:10579.1Re-query CCDS DB by GeneID:9738See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10579.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396208.4 ENSP00000379511.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396208.4Link to Ensembl Protein Viewer:ENSP00000379511.2Re-query CCDS DB by Nucleotide ID:ENST00000396208Re-query CCDS DB by Protein ID:ENSP00000379511
Original member Current member EBI ENST00000396212.6 ENSP00000379515.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396212.6Link to Ensembl Protein Viewer:ENSP00000379515.2Re-query CCDS DB by Nucleotide ID:ENST00000396212Re-query CCDS DB by Protein ID:ENSP00000379515
Original member Current member EBI ENST00000694978.1 ENSP00000511625.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000694978.1Link to Ensembl Protein Viewer:ENSP00000511625.1Re-query CCDS DB by Nucleotide ID:ENST00000694978Re-query CCDS DB by Protein ID:ENSP00000511625
Original member Current member NCBI NM_001323570.2 NP_001310499.1 Accepted alive Link to Nucleotide Sequence:NM_001323570.2Link to Protein Sequence:NP_001310499.1Re-query CCDS DB by Nucleotide ID:NM_001323570Re-query CCDS DB by Protein ID:NP_001310499Link to BLAST:NP_001310499.1
Original member Current member NCBI NM_001323571.2 NP_001310500.1 Accepted alive Link to Nucleotide Sequence:NM_001323571.2Link to Protein Sequence:NP_001310500.1Re-query CCDS DB by Nucleotide ID:NM_001323571Re-query CCDS DB by Protein ID:NP_001310500Link to BLAST:NP_001310500.1
Original member Current member NCBI NM_001323572.2 NP_001310501.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001323572.2Link to Protein Sequence:NP_001310501.1Re-query CCDS DB by Nucleotide ID:NM_001323572Re-query CCDS DB by Protein ID:NP_001310501Link to BLAST:NP_001310501.1
Original member Current member NCBI NM_014711.6 NP_055526.4 Accepted alive Link to Nucleotide Sequence:NM_014711.6Link to Protein Sequence:NP_055526.4Re-query CCDS DB by Nucleotide ID:NM_014711Re-query CCDS DB by Protein ID:NP_055526Link to BLAST:NP_055526.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001310499.1 991 O43303-2 991 100% 0 0
NP_001310500.1 991 O43303-2 991 100% 0 0
NP_001310501.1 991 O43303-2 991 100% 0 0
NP_055526.4 991 O43303-2 991 100% 0 0

Chromosomal Locations for CCDS 10579.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 19527882 19528022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19532416 19532544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19535940 19537587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19540657 19540787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19541887 19542064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19542621 19542760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19542878 19542994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19544797 19544898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19545094 19545210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19545817 19545890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19546412 19546474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19547955 19548014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19551196 19551271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2976 nt):
ATGGAGGAGTATGAGAAGTTCTGTGAAAAAAGTCTTGCCAGAATACAAGAAGCATCACTATCCACAGAGA
GCTTTCTCCCTGCTCAGTCTGAAAGTATCTCACTTATTCGCTTTCATGGAGTGGCTATCCTTTCTCCACT
GCTTAACATTGAGAAAAGAAAGGAAATGCAACAAGAAAAGCAGAAAGCACTTGATGTAGAAGCAAGAAAG
CAGGTTAACAGGAAGAAAGCTTTACTGACTCGTGTCCAGGAGATTCTTGACAATGTTCAGGTTAGAAAAG
CACCTAATGCCAGTGATTTTGATCAGTGGGAGATGGAAACAGTTTACTCTAATTCAGAAGTCAGAAACTT
GAATGTTCCTGCTACATTTCCAAATAGCTTTCCAAGCCATACGGAACACTCTACTGCAGCAAAGCTTGAT
AAGATAGCTGGGATTTTGCCATTGGATAATGAGGACCAATGTAAAACTGATGGAATAGACTTAGCTAGAG
ATTCAGAAGGATTTAATTCTCCGAAGCAATGTGATAGTTCCAATATTAGTCATGTAGAAAATGAAGCTTT
TCCAAAGACCTCTTCAGCAACCCCACAAGAAACTCTTATTTCTGATGGTCCCTTCTCAGTAAATGAACAA
CAGGATCTACCACTTTTGGCAGAAGTCATCCCAGATCCCTATGTAATGAGTCTTCAGAATCTGATGAAAA
AGTCAAAGGAATATATAGAAAGAGAACAATCTAGACGCAGTCTGAGAGGTAGTATCAACAGAATTGTTAA
TGAGAGTCATTTAGACAAAGAACATGATGCTGTTGAAGTGGCTGACTGTGTAAAAGAGAAAGGCCAGTTG
ACAGGCAAACACTGTGTCTCAGTTATTCCTGACAAACCAAGCCTTAATAAATCAAATGTTCTTCTCCAAG
GTGCTTCCACTCAAGCAAGCAGCATGAGTATGCCAGTTTTAGCTAGCTTTTCGAAAGTGGACATACCTAT
ACGAACTGGCCATCCCACTGTTCTAGAGTCTAATTCTGATTTTAAAGTTATTCCCACTTTTGTTACCGAA
AATAATGTTATCAAAAGTCTTACAGGTTCATATGCCAAATTACCTAGTCCAGAGCCAAGTATGAGTCCTA
AAATGCACCGAAGACGTTCCAGGACATCATCAGCGTGTCATATACTTATAAATAACCCAATAAATGCCTG
TGAATTAAGCCCTAAAGGAAAAGAACAGGCAATGGACTTAATTATTCAAGATACTGATGAAAACACAAAT
GTGCCCGAAATTATGCCAAAGTTACCAACTGATTTAGCGGGAGTTTGTTCAAGCAAGGTTTATGTGGGCA
AAAATACATCTGAAGTCAAAGAAGATGTGGTTTTAGGTAAATCAAATCAGGTATGTCAATCTTCAGGAAA
TCATTTAGAAAATAAAGTTACTCATGGACTTGTTACTGTGGAAGGTCAGTTAACATCCGATGAGAGAGGC
GCACACATAATGAACAGTACCTGTGCTGCGATGCCAAAGCTGCATGAACCATATGCCAGCAGTCAGTGTA
TAGCAAGTCCAAACTTTGGAACTGTGAGTGGACTCAAGCCAGCCAGTATGTTAGAGAAAAACTGCAGTTT
GCAAACAGAACTGAATAAGTCTTATGATGTAAAAAACCCTTCTCCTTTATTGATGCAAAACCAGAATACG
AGACAGCAGATGGACACACCTATGGTGTCCTGTGGAAATGAACAATTTTTGGATAACAGTTTTGAGAAAG
TTAAACGGAGACTTGATTTAGATATTGATGGTTTGCAAAAAGAAAACTGCCCTTATGTCATAACAAGTGG
AATAACTGAACAAGAAAGGCAACATTTGCCAGAAAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAG
AATAAAATGTTAGGAACTAGTTCCAAAGAAAGCGAGGAGTTACTAAAAAGCAAGATGTTAGCTTTTGAAG
AAATGCGGAAGAGACTAGAAGAACAGCACGCCCAGCAATTATCACTACTCATAGCTGAGCAGGAAAGGGA
ACAAGAAAGACTGCAAAAGGAAATAGAAGAGCAGGAGAAAATGTTAAAAGAGAAGAAGGCAATGACAGCG
GAAGCCTCTGAGTTGGACATTAACAATGCAGTGGAATTAGAATGGAGAAAAATAAGTGACTCTAGTTTGC
TGGAAACAATGCTGTCTCAAGCGGACTCACTCCATACTTCAAATTCAAATAGTTCTGGTTTCACAAATTC
TGCCATGCAATATAGCTTTGTTTCTGCAAACGAAGCACCATTCTACCTCTGGGGATCATCAACTAGTGGC
TTGACCAAACTCTCAGTAACAAGGCCTTTTGGAAGAGCCAAAACTAGATGGTCTCAAGTTTTTAGTCTGG
AAATACAAGCAAAATTTAACAAAATAACTGCAGTGGCAAAAGGATTTCTTACTCGTAGACTTATGCAGAC
AGATAAGCTGAAGCAACTTCGACAAACTGTAAAAGATACTATGGAATTCATAAGAAGTTTTCAGTCAGAA
GCACCATTAAAGAGAGGCATTGTTTCAGCTCAAGATGCTTCACTTCAGGAAAGAGTGTTAGCTCAGTTGC
GAGCTGCCTTGTACGGTATTCATGACATATTCTTTGTAATGGATGCAGCTGAAAGAATGTCTATTCTACA
TCATGATCGAGAAGTTCGCAAAGAGAAAATGCTCAGGCAAATGGATAAAATGAAAAGTCCACGAGTGGCT
CTTTCAGCTGCAACACAGAAGTCTCTTGATAGGAAGAAATACATGAAAGCTGCTGAAATGGGAATGCCAA
ATAAGAAATTTCTGGTTAAACAAAATCCTTCTGAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATGC
ACCTGTTCATAGGCTACTTAGTAGACAAGGGAGTATATGCAGGAAAAATCCAAAGAAAGCGGCCAAATGT
TGCGACAATTTAAGAAGACAACATTCATTAGGATAA

Translation (991 aa):
MEEYEKFCEKSLARIQEASLSTESFLPAQSESISLIRFHGVAILSPLLNIEKRKEMQQEKQKALDVEARK
QVNRKKALLTRVQEILDNVQVRKAPNASDFDQWEMETVYSNSEVRNLNVPATFPNSFPSHTEHSTAAKLD
KIAGILPLDNEDQCKTDGIDLARDSEGFNSPKQCDSSNISHVENEAFPKTSSATPQETLISDGPFSVNEQ
QDLPLLAEVIPDPYVMSLQNLMKKSKEYIEREQSRRSLRGSINRIVNESHLDKEHDAVEVADCVKEKGQL
TGKHCVSVIPDKPSLNKSNVLLQGASTQASSMSMPVLASFSKVDIPIRTGHPTVLESNSDFKVIPTFVTE
NNVIKSLTGSYAKLPSPEPSMSPKMHRRRSRTSSACHILINNPINACELSPKGKEQAMDLIIQDTDENTN
VPEIMPKLPTDLAGVCSSKVYVGKNTSEVKEDVVLGKSNQVCQSSGNHLENKVTHGLVTVEGQLTSDERG
AHIMNSTCAAMPKLHEPYASSQCIASPNFGTVSGLKPASMLEKNCSLQTELNKSYDVKNPSPLLMQNQNT
RQQMDTPMVSCGNEQFLDNSFEKVKRRLDLDIDGLQKENCPYVITSGITEQERQHLPEKRYPKGSGFVNK
NKMLGTSSKESEELLKSKMLAFEEMRKRLEEQHAQQLSLLIAEQEREQERLQKEIEEQEKMLKEKKAMTA
EASELDINNAVELEWRKISDSSLLETMLSQADSLHTSNSNSSGFTNSAMQYSFVSANEAPFYLWGSSTSG
LTKLSVTRPFGRAKTRWSQVFSLEIQAKFNKITAVAKGFLTRRLMQTDKLKQLRQTVKDTMEFIRSFQSE
APLKRGIVSAQDASLQERVLAQLRAALYGIHDIFFVMDAAERMSILHHDREVRKEKMLRQMDKMKSPRVA
LSAATQKSLDRKKYMKAAEMGMPNKKFLVKQNPSETRVLQPNQGQNAPVHRLLSRQGSICRKNPKKAAKC
CDNLRRQHSLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH