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Report for CCDS10845.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10845.1 Public Homo sapiens 16 GFOD2 24 110 108 CCDS HistoryNCBI Gene:81577Re-query CCDS DB by CCDS ID:10845.1Re-query CCDS DB by GeneID:81577See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10845.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268797.12 ENSP00000268797.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268797.12Link to Ensembl Protein Viewer:ENSP00000268797.7Re-query CCDS DB by Nucleotide ID:ENST00000268797Re-query CCDS DB by Protein ID:ENSP00000268797
Original member Current member NCBI NM_030819.4 NP_110446.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030819.4Link to Protein Sequence:NP_110446.3Re-query CCDS DB by Nucleotide ID:NM_030819Re-query CCDS DB by Protein ID:NP_110446Link to BLAST:NP_110446.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110446.3 385 Q3B7J2-1 385 100% 0 0

Chromosomal Locations for CCDS 10845.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67675155 67676053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67685457 67685715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGAAGATGCTGCCAGGAGTGGGCGTGTTTGGGACTGGCAGCTCCGCCCGAGTTCTGGTCCCACTGCTGA
GGGCAGAAGGGTTCACTGTTGAGGCCCTGTGGGGGAAGACTGAGGAGGAGGCGAAGCAGCTTGCTGAGGA
GATGAACATCGCCTTCTACACCAGCCGGACTGATGACATCTTGCTGCATCAAGATGTGGATCTGGTGTGC
ATCAGCATCCCCCCTCCACTCACCCGGCAGATATCCGTGAAGGCTCTAGGTATTGGGAAGAATGTGGTTT
GCGAGAAGGCAGCAACATCGGTGGATGCCTTCCGGATGGTGACAGCCTCGCGCTACTACCCGCAGCTCAT
GAGCCTGGTAGGGAACGTGCTGCGCTTCCTGCCTGCCTTCGTGCGCATGAAACAGCTGATTTCGGAACAC
TATGTGGGAGCGGTGATGATCTGTGATGCCCGCATCTACTCAGGCAGCCTGCTGAGCCCCAGCTATGGCT
GGATCTGTGATGAGCTCATGGGCGGCGGGGGCTTGCACACCATGGGGACCTACATTGTGGACCTGCTGAC
CCACCTGACCGGCCGGAGAGCCGAGAAGGTGCACGGGCTGCTCAAGACATTCGTGAGGCAGAACGCTGCC
ATCCGTGGCATCCGGCACGTCACTAGCGATGACTTCTGTTTCTTCCAGATGCTCATGGGTGGGGGTGTGT
GTAGCACAGTGACACTCAACTTCAACATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTGC
AGGACGCCTCGTCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTC
TTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGGGCCCCAGGATGTCCCGCTGCTGTACC
TGAAGGGCATGGTCTACATGGTGCAGGCCTTGCGCCAGTCCTTCCAGGGGCAGGGCGACCGCCGCACCTG
GGACCGCACCCCTGTCTCCATGGCCGCCTCCTTCGAGGATGGGCTGTACATGCAGAGCGTGGTGGATGCC
ATCAAGAGGTCGAGCCGATCCGGGGAGTGGGAGGCTGTGGAGGTGCTGACGGAGGAGCCCGACACCAACC
AGAACCTGTGTGAGGCACTTCAGCGGAACAACCTATGA

Translation (385 aa):
MKMLPGVGVFGTGSSARVLVPLLRAEGFTVEALWGKTEEEAKQLAEEMNIAFYTSRTDDILLHQDVDLVC
ISIPPPLTRQISVKALGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLISEH
YVGAVMICDARIYSGSLLSPSYGWICDELMGGGGLHTMGTYIVDLLTHLTGRRAEKVHGLLKTFVRQNAA
IRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSATQEELL
LRDSLAVGAGLPEQGPQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDRTPVSMAASFEDGLYMQSVVDA
IKRSSRSGEWEAVEVLTEEPDTNQNLCEALQRNNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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