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Report for CCDS11036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11036.1 Public Homo sapiens 17 24 110 108 CCDS HistoryNCBI Gene:83903Re-query CCDS DB by CCDS ID:11036.1Re-query CCDS DB by GeneID:83903See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325418.5 ENSP00000325290.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325418.5Link to Ensembl Protein Viewer:ENSP00000325290.4Re-query CCDS DB by Nucleotide ID:ENST00000325418Re-query CCDS DB by Protein ID:ENSP00000325290
Original member Current member NCBI NM_031965.2 NP_114171.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031965.2Link to Protein Sequence:NP_114171.2Re-query CCDS DB by Nucleotide ID:NM_031965Re-query CCDS DB by Protein ID:NP_114171Link to BLAST:NP_114171.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114171.2 798 Q8TF76-1 798 100% 0 0

Chromosomal Locations for CCDS 11036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 3723936 3726332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2397 nt):
ATGGCGGCTTCGCTCCCGGGACCTGGGAGCCGGCTTTTCCGCACATATGGGGCTGCGGACGGCAGGAGAC
AGCGGCGGCCGGGCCGGGAAGCCGCGCAGTGGTTCCCGCCGCAGGACCGGAGGCGTTTCTTCAACAGCAG
CGGCAGCAGCGACGCCAGCATCGGCGACCCCTCGCAGTCCGACGATCCTGACGATCCCGACGACCCCGAC
TTCCCCGGCAGCCCGGTGAGGCGGCGGCGGAGGCGTCCCGGCGGCCGAGTGCCCAAGGACCGGCCCAGCC
TGACCGTGACCCCAAAGCGCTGGAAGCTGCGAGCTCGCCCAAGCCTAACCGTGACCCCAAGACGCCTGGG
GCTGCGAGCTCGGCCCCCGCAGAAGTGCAGCACACCCTGCGGCCCGCTCCGACTTCCGCCCTTCCCCAGC
CGCGACTCCGGCCGCCTCAGCCCGGACCTCAGCGTGTGCGGCCAGCCCAGGGACGGCGACGAGCTGGGCA
TCAGTGCCTCCCTGTTCAGCTCTCTGGCCTCGCCCTGCCCCGGGTCCCCAACGCCAAGGGACAGTGTCAT
CTCGATCGGCACCTCCGCCTGTCTGGTTGCAGCCTCAGCCGTCCCGAGCGGCCTCCACCTCCCAGAAGTC
TCCCTGGACCGAGCATCTCTCCCCTGCTCCCAGGAGGAAGCGACAGGAGGAGCCAAGGACACCAGGATGG
TCCACCAAACCCGCGCCAGCCTCAGGTCAGTTCTCTTTGGCCTTATGAACTCAGGAACCCCTGAGGATTC
TGAGTTTCGGGCAGATGGGAAGAATATGAGAGAGTCCTGCTGTAAAAGGAAACTGGTGGTGGGAAATGGA
CCAGAGGGTCCAGGTCTGTCAAGCACAGGCAAGAGGAGGGCCACAGGCCAGGACTCTTGTCAAGAGAGAG
GGCTTCAAGAGGCCGTCCGGAGAGAGCATCAGGAGGCCAGTGTTCCCAAGGGCCGCATTGTGCCAAGGGG
AATAGACAGGCTGGAGAGAACTAGATCAAGCCGGAAGAGCAAACATCAGGAGGCAACGGAAACCTCTCTC
CTCCATTCCCACCGCTTTAAAAAGGGCCAAAAGCTGGGAAAAGATTCGTTCCCCACCCAGGACCTGACTC
CTTTACAGAATGTCTGCTTTTGGACCAAAACCAGGGCTTCCTTCAGTTTCCACAAGAAGAAAATTGTGAC
TGATGTGTCAGAGGTCTGCAGCATCTATACCACTGCCACTTCTCTCTCTGGATCCCTCCTATCAGAATGT
TCAAACCGGCCTGTCATGAACAGAACAAGTGGTGCTCCGTCCTCTTGGCACTCCTCCTCTATGTATTTGC
TAAGCCCCTTAAACACTCTAAGTATTTCAAACAAAAAGGCATCTGATGCTGAAAAGGTTTATGGGGAATG
CAGTCAGAAGGGTCCTGTCCCCTTTAGCCATTGCCTTCCCACAGAAAAACTGCAACGCTGTGAGAAGATT
GGGGAAGGGGTGTTTGGCGAAGTGTTTCAAACAATTGCTGATCACACACCCGTAGCCATAAAAATCATTG
CTATTGAAGGACCAGATTTAGTCAATGGATCCCATCAGAAAACCTTTGAGGAAATCCTGCCAGAGATCAT
CATCTCCAAAGAGTTGAGCCTCTTATCCGGTGAAGTGTGCAACCGCACAGAAGGCTTTATCGGGCTGAAC
TCAGTGCACTGTGTCCAGGGATCTTACCCTCCCTTGCTCCTCAAAGCCTGGGATCACTATAATTCAACCA
AAGGCTCTGCAAATGACCGGCCTGATTTTTTTAAAGACGACCAGCTCTTCATTGTGCTGGAATTTGAGTT
TGGAGGGATTGACTTAGAGCAAATGCGAACCAAGTTGTCTTCCTTGGCTACTGCAAAGAGCATTCTACAC
CAGCTCACAGCCTCCCTCGCAGTGGCAGAGGCATCACTGCGCTTTGAGCACCGAGACTTACACTGGGGGA
ACGTGCTCTTAAAGAAAACCAGCCTCAAAAAACTCCACTACACCCTCAATGGGAAGAGCAGCACTATCCC
CAGCTGTGGGTTGCAAGTGAGCATCATTGACTACACCCTGTCGCGCTTGGAACGGGATGGGATTGTGGTT
TTCTGTGACGTTTCCATGGATGAGGACCTGTTTACCGGTGACGGTGACTACCAGTTTGACATCTACAGGC
TCATGAAGAAGGAGAATAACAACCGCTGGGGTGAATATCACCCTTATAGTAATGTGCTCTGGTTACATTA
CCTGACAGACAAGATGCTGAAACAAATGACCTTCAAGACTAAATGTAACACTCCTGCCATGAAGCAAATT
AAGAGAAAAATCCAGGAGTTCCACAGGACAATGCTGAACTTCAGCTCTGCCACTGACTTGCTCTGCCAGC
ACAGTCTGTTTAAGTAA

Translation (798 aa):
MAASLPGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQSDDPDDPDDPD
FPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCGPLRLPPFPS
RDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSPTPRDSVISIGTSACLVAASAVPSGLHLPEV
SLDRASLPCSQEEATGGAKDTRMVHQTRASLRSVLFGLMNSGTPEDSEFRADGKNMRESCCKRKLVVGNG
PEGPGLSSTGKRRATGQDSCQERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKSKHQEATETSL
LHSHRFKKGQKLGKDSFPTQDLTPLQNVCFWTKTRASFSFHKKKIVTDVSEVCSIYTTATSLSGSLLSEC
SNRPVMNRTSGAPSSWHSSSMYLLSPLNTLSISNKKASDAEKVYGECSQKGPVPFSHCLPTEKLQRCEKI
GEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN
SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILH
QLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVV
FCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQI
KRKIQEFHRTMLNFSSATDLLCQHSLFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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