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Report for CCDS112.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
112.1 |
Public |
Homo sapiens |
1 |
KIF1B |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23095](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:112.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23095](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 112.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000377083.5 |
ENSP00000366287.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000377083.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000366287.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000377083](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000366287](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000377093.9 |
ENSP00000366297.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000377093.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000366297.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000377093](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000366297](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001365953.1 |
NP_001352882.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001365953.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001352882.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001365953](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001352882](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001352882.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_183416.4 |
NP_904325.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_183416.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_904325.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_183416](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_904325](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_904325.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 112.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3462 nt): ATGTCGGGAGCCTCAGTGAAGGTGGCTGTCCGGGTAAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAAT CCAAATGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAATCCAAAGGAAGCTCC AAAGTCCTTCAGCTTCGACTATTCCTACTGGTCTCATACCTCACCCGAAGATCCCTGTTTTGCATCTCAA AACCGTGTGTACAATGACATTGGCAAGGAAATGCTCTTACACGCCTTTGAGGGATATAATGTCTGTATTT TTGCCTATGGGCAGACTGGTGCTGGAAAATCTTATACAATGATGGGTAAACAAGAAGAAAGCCAGGCTGG CATCATTCCACAGTTATGTGAAGAACTTTTTGAGAAAATCAATGACAACTGTAATGAAGAAATGTCTTAC TCTGTAGAGGTGAGCTACATGGAAATTTACTGTGAAAGAGTACGAGATTTGCTGAATCCAAAAAACAAGG GTAATTTGCGTGTGCGTGAACACCCACTTCTTGGACCCTATGTGGAGGATCTGTCCAAGTTGGCAGTTAC TTCCTACACAGACATTGCTGACCTCATGGATGCTGGGAACAAAGCCAGGACAGTGGCAGCTACAAACATG AATGAAACAAGTAGCCGTTCCCACGCTGTGTTTACGATTGTTTTCACCCAGAAGAAACACGATAATGAGA CCAACCTTTCCACTGAGAAGGTCAGTAAAATCAGCTTGGTGGATCTAGCAGGAAGTGAACGAGCTGATTC AACTGGTGCCAAAGGGACTCGATTAAAGGAAGGAGCAAATATTAATAAGTCTCTTACAACTTTGGGCAAA GTCATTTCAGCCTTGGCCGAGGTGAGTAAAAAGAAGAAGAAAACAGATTTTATTCCCTACAGGGATTCTG TACTTACTTGGCTCCTTCGAGAAAATTTAGGTGGCAATTCTCGGACTGCAATGGTTGCTGCTCTGAGCCC CGCGGATATCAACTACGATGAGACTTTGAGCACTCTGAGATATGCAGATCGTGCAAAACAAATTAAATGC AATGCTGTTATCAATGAGGACCCCAATGCCAAACTGGTTCGTGAATTAAAGGAGGAGGTGACACGGCTGA AGGACCTTCTTCGTGCTCAGGGCCTGGGAGATATTATTGATACATCCATGGGGTCCCTCACTTCATCCCC ATCTTCCTGCTCACTCAGTAGTCAGGTGGGCTTGACGTCTGTGACCAGTATTCAAGAGAGGATCATGTCT ACACCTGGAGGAGAGGAAGCTATTGAACGTTTAAAGGAATCAGAGAAGATCATTGCTGAGTTGAATGAAA CTTGGGAAGAGAAGCTTCGTAAAACAGAGGCCATCAGAATGGAGAGAGAGGCTTTGTTGGCTGAGATGGG AGTTGCCATTCGGGAAGATGGAGGAACCCTAGGGGTTTTCTCACCTAAAAAGACCCCACATCTTGTTAAC CTCAATGAAGACCCACTAATGTCTGAGTGCCTACTTTATTACATCAAAGATGGAATTACAAGGGTTGGCC AAGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGCGGGGCTCACATTAAAGAAGAGCATTGTATCTT CCGGAGTGAGAGAAGCAACAGCGGGGAAGTTATCGTGACCTTAGAGCCCTGTGAGCGCTCAGAAACCTAC GTAAATGGCAAGAGGGTGTCCCAGCCTGTTCAGCTGCGCTCAGGAAACCGTATCATCATGGGTAAAAACC ATGTTTTCCGCTTTAACCACCCGGAACAAGCACGAGCTGAGCGAGAGAAGACTCCTTCTGCTGAGACCCC CTCTGAGCCTGTGGACTGGACATTTGCCCAGAGGGAGCTTCTGGAAAAACAAGGAATTGATATGAAACAA GAGATGGAGAAAAGGCTACAGGAAATGGAGATCTTATACAAAAAGGAGAAGGAAGAAGCAGATCTTCTTT TGGAGCAGCAGAGACTGGACGCGGATTCTGATAGCGGGGACGATTCTGACAAGAGGTCGTGTGAAGAGAG CTGGAAACTGATTACTTCTCTGAGAGAAAAGCTACCTCCCAGCAAGTTGCAAACCATTGTTAAAAAATGT GGCCTCCCAAGCAGTGGGAAGAAACGTGAACCAATTAAAATGTATCAGATACCCCAAAGAAGGCGCTTGA GTAAAGATTCCAAGTGGGTCACAATCTCAGATCTTAAAATTCAGGCTGTCAAAGAGATTTGCTATGAGGT TGCTCTCAATGACTTCAGGCACAGTCGGCAGGAGATTGAAGCCCTGGCCATTGTCAAGATGAAGGAGCTT TGTGCCATGTATGGCAAGAAAGACCCCAATGAGCGGGACTCCTGGAGGGCAGTGGCCAGGGACGTCTGGG ATACCGTCGGTGTTGGGGATGAGAAGATCGAAGACGTCATGGCCACTGGGAAAGGCAGCACTGATGTAGA TGACCTCAAGGTTCATATAGACAAGCTGGAAGATATTTTGCAAGAAGTCAAAAAGCAAAATAACATGAAA GACGAGGAGATAAAAGTCTTAAGAAATAAAATGCTCAAAATGGAAAAAGTCTTGCCACTGATCGGATCTC AGGAACAGAAAAGCCCAGGAAGCCACAAAGCAAAGGAGCCTGTTGGTGCTGGTGTTAGTAGCACCTCTGA GAATAATGTAAGTAAAGGAGACAATGGAGAACTTGCAAAAGAAGAACGTGTTTCCCAGCTGATGAATGGG GATCCAGCTTTTAGACGTGGACGTCTGCGCTGGATGAGGCAAGAGCAAATTCGGTTTAAGAACTTGCAAC AGCAGGAGATAACAAAGCAGCTTCGTCGGCAGAATGTACCTCATAGGTTCATCCCTCCTGAGAACCGGAA GCCCCGCTTCCCCTTTAAGAGCAACCCTAAACACAGAAACTCTTGGAGTCCTGGGACACATATCATCATA ACAGAAGATGAGGTTATAGAGCTTAGGATTCCAAAAGACGATGAAGCAAGGAAAGGGAATAAAGAAGAGA GCCAAGAAAAAGGGGGTAAAGGAGCTTTTAAGGATCCCCAGTTTCCATGGGGCTCTCAAGGAATGAGAAG TCAAGATCACATCCAAGTTAGCAAGCAGCACATTAATAATCAGCAACAGCCACCTCAACTACGTTGGAGA AGCAATTCTCTCAATAATGGCCAGCCGAAAAGTACGCGCTGCCAGGCATCTGCCTCCGCGGAGTCATTAA ACTCCCACAGTGGTCACCCCACTGCTGATGTACAGACTTTCCAGGCAAAGCGCCATATTCATCAACACCG TCAGTCTTACTGTAATTATAACACTGGAGGTCAGTTAGAGGGCAATGCAGCCACTTCCTATCAGAAGCAG ACTGACAAACCCAGCCACTGTAGCCAGTTTGTGACACCTCCGCGGATGAGGAGACAGTTCTCAGCACCCA ATCTCAAAGCTGGTCGAGAAACCACAGTATAA
Translation (1153 aa): MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSHTSPEDPCFASQ NRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSY SVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNM NETSSRSHAVFTIVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK VISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKC NAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSMGSLTSSPSSCSLSSQVGLTSVTSIQERIMS TPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIREDGGTLGVFSPKKTPHLVN LNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHIKEEHCIFRSERSNSGEVIVTLEPCERSETY VNGKRVSQPVQLRSGNRIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQ EMEKRLQEMEILYKKEKEEADLLLEQQRLDADSDSGDDSDKRSCEESWKLITSLREKLPPSKLQTIVKKC GLPSSGKKREPIKMYQIPQRRRLSKDSKWVTISDLKIQAVKEICYEVALNDFRHSRQEIEALAIVKMKEL CAMYGKKDPNERDSWRAVARDVWDTVGVGDEKIEDVMATGKGSTDVDDLKVHIDKLEDILQEVKKQNNMK DEEIKVLRNKMLKMEKVLPLIGSQEQKSPGSHKAKEPVGAGVSSTSENNVSKGDNGELAKEERVSQLMNG DPAFRRGRLRWMRQEQIRFKNLQQQEITKQLRRQNVPHRFIPPENRKPRFPFKSNPKHRNSWSPGTHIII TEDEVIELRIPKDDEARKGNKEESQEKGGKGAFKDPQFPWGSQGMRSQDHIQVSKQHINNQQQPPQLRWR SNSLNNGQPKSTRCQASASAESLNSHSGHPTADVQTFQAKRHIHQHRQSYCNYNTGGQLEGNAATSYQKQ TDKPSHCSQFVTPPRMRRQFSAPNLKAGRETTV
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