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Report for CCDS11344.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11344.1 Public Homo sapiens 17 MIEN1 24 110 108 CCDS HistoryNCBI Gene:84299Re-query CCDS DB by CCDS ID:11344.1Re-query CCDS DB by GeneID:84299See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11344.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394231.8 ENSP00000377778.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394231.8Link to Ensembl Protein Viewer:ENSP00000377778.3Re-query CCDS DB by Nucleotide ID:ENST00000394231Re-query CCDS DB by Protein ID:ENSP00000377778
Original member Current member NCBI NM_032339.5 NP_115715.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032339.5Link to Protein Sequence:NP_115715.3Re-query CCDS DB by Nucleotide ID:NM_032339Re-query CCDS DB by Protein ID:NP_115715Link to BLAST:NP_115715.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115715.3 115 Q9BRT3 115 100% 0 0

Chromosomal Locations for CCDS 11344.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 39729522 39729605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 39729685 39729761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 39730194 39730291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 39730407 39730495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGAGCGGGGAGCCGGGGCAGACGTCCGTAGCGCCCCCTCCCGAGGAGGTCGAGCCGGGCAGTGGGGTCC
GCATCGTGGTGGAGTACTGTGAACCCTGCGGCTTCGAGGCGACCTACCTGGAGCTGGCCAGTGCTGTGAA
GGAGCAGTATCCGGGCATCGAGATCGAGTCGCGCCTCGGGGGCACAGGTGCCTTTGAGATAGAGATAAAT
GGACAGCTGGTGTTCTCCAAGCTGGAGAATGGGGGCTTTCCCTATGAGAAAGATCTCATTGAGGCCATCC
GAAGAGCCAGTAATGGAGAAACCCTAGAAAAGATCACCAACAGCCGTCCTCCCTGCGTCATCCTGTGA

Translation (115 aa):
MSGEPGQTSVAPPPEEVEPGSGVRIVVEYCEPCGFEATYLELASAVKEQYPGIEIESRLGGTGAFEIEIN
GQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRPPCVIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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