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Report for CCDS11371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11371.1 Public Homo sapiens 17 KRT222 24 110 108 CCDS HistoryNCBI Gene:125113Re-query CCDS DB by CCDS ID:11371.1Re-query CCDS DB by GeneID:125113See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11371.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394052.5 ENSP00000377616.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394052.5Link to Ensembl Protein Viewer:ENSP00000377616.3Re-query CCDS DB by Nucleotide ID:ENST00000394052Re-query CCDS DB by Protein ID:ENSP00000377616
Original member Current member EBI ENST00000476049.1 ENSP00000463483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000476049.1Link to Ensembl Protein Viewer:ENSP00000463483.1Re-query CCDS DB by Nucleotide ID:ENST00000476049Re-query CCDS DB by Protein ID:ENSP00000463483
Original member Current member NCBI NM_152349.3 NP_689562.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152349.3Link to Protein Sequence:NP_689562.1Re-query CCDS DB by Nucleotide ID:NM_152349Re-query CCDS DB by Protein ID:NP_689562Link to BLAST:NP_689562.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689562.1 295 Q8N1A0-1 295 100% 0 0

Chromosomal Locations for CCDS 11371.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 40656402 40656630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40657352 40657487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40657674 40657750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40659987 40660207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40661916 40662044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40665004 40665099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGGAACTGTCCCAGCTACTCAATGAGATCAGGGCAAACTATGAAAAGATCCTCACCAGAAATCAGATAG
AGACGGTGCTCTCAACAAGGATCCAGCTAGAAGAAGACATAAGCAAAAAAATGGACAAAGATGAAGAGGC
TTTGAAGGCAGCTCAAGCAGAACTCAAGGAGGCCCGACGCCAGTGGCACCACCTGCAAGTGGAAATTGAA
TCTCTCCATGCTGTGGAAAGGGGCCTTGAAAACTCCCTACATGCCAGCGAGCAGCATTACCAGATGCAGC
TGCAAGACCTAGAGACTGTGATTGAAGGACTAGAAAAAGAGCTACAGGAAGTAAGGCGCGGCATCGAAAA
GCAGCTTCAAGAGCACGAGATGCTTCTCAACACGAAGATGAGGCTGGAACAAGAAATAGCAACTTATCGC
CACCTCCTAGAAAAAGAAGAAATCAGATATTATGGTTGTATCCAAGGTGGGAAAAAAGACAAAAAGCCTA
CCACAAGTAGAGTTGGTTTTGTTTTACCATCAGCCATTATAAATGAAATATCTTTTACTACAAAAGTCCC
ACAAAAGTATGAGAATGAAAATGTAGAAACAGTAACCAAACAGGCAATCTTAAATGGGAGTATCGTTAAG
GAGAGCACTGAAGCTCATGGCACTATTCAGACAGAGAAAGTGGATGAAGTTATTAAAGAATGGGAAGGTT
CTTTCTTTAAAGATAACCCTCGATTGAGGAAAAAGTCTGTTTCTCTTCGATTTGATCTTCATTTAGCAGC
CACTGATGAAGGGTGTTTAGAGACTAAGCAGGATAATCTACCAGATATAGAAGTCAGGCTTATCATGAGA
AGATCATGCAGTATTCCCTCTATCAAACCTCCATCAACAGCTAATTAA

Translation (295 aa):
MELSQLLNEIRANYEKILTRNQIETVLSTRIQLEEDISKKMDKDEEALKAAQAELKEARRQWHHLQVEIE
SLHAVERGLENSLHASEQHYQMQLQDLETVIEGLEKELQEVRRGIEKQLQEHEMLLNTKMRLEQEIATYR
HLLEKEEIRYYGCIQGGKKDKKPTTSRVGFVLPSAIINEISFTTKVPQKYENENVETVTKQAILNGSIVK
ESTEAHGTIQTEKVDEVIKEWEGSFFKDNPRLRKKSVSLRFDLHLAATDEGCLETKQDNLPDIEVRLIMR
RSCSIPSIKPPSTAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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