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Report for CCDS11614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11614.1 Public Homo sapiens 17 PRR11 24 110 108 CCDS HistoryNCBI Gene:55771Re-query CCDS DB by CCDS ID:11614.1Re-query CCDS DB by GeneID:55771See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262293.9 ENSP00000262293.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262293.9Link to Ensembl Protein Viewer:ENSP00000262293.5Re-query CCDS DB by Nucleotide ID:ENST00000262293Re-query CCDS DB by Protein ID:ENSP00000262293
Original member Current member EBI ENST00000580177.5 ENSP00000463733.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000580177.5Link to Ensembl Protein Viewer:ENSP00000463733.1Re-query CCDS DB by Nucleotide ID:ENST00000580177Re-query CCDS DB by Protein ID:ENSP00000463733
Original member Current member EBI ENST00000578542.5 ENSP00000464171.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000578542.5Link to Ensembl Protein Viewer:ENSP00000464171.1Re-query CCDS DB by Nucleotide ID:ENST00000578542Re-query CCDS DB by Protein ID:ENSP00000464171
Original member Current member EBI ENST00000614081.1 ENSP00000481852.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614081.1Link to Ensembl Protein Viewer:ENSP00000481852.1Re-query CCDS DB by Nucleotide ID:ENST00000614081Re-query CCDS DB by Protein ID:ENSP00000481852
Original member Current member NCBI NM_018304.4 NP_060774.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018304.4Link to Protein Sequence:NP_060774.2Re-query CCDS DB by Nucleotide ID:NM_018304Re-query CCDS DB by Protein ID:NP_060774Link to BLAST:NP_060774.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060774.2 360 Q96HE9 360 100% 0 0

Chromosomal Locations for CCDS 11614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 59169753 59169880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59185054 59185204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59185440 59185562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59193492 59193734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59194757 59194855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59195331 59195443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59197544 59197603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59197693 59197789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59201563 59201631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGCCCAAGTTCAAACAACGAAGACGAAAGCTAAAAGCCAAAGCCGAAAGATTATTCAAAAAAAAAGAAG
CCTCTCACTTTCAGTCCAAGCTAATTACACCTCCTCCTCCACCACCCTCACCAGAAAGAGTCGGTATTTC
TTCAATAGATATATCTCAAAGCAGAAGCTGGCTAACATCATCCTGGAACTTCAATTTTCCTAACATCAGA
GATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATATACAGCTGGTGCCAGAACTGCATAACCCAGA
GTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTATCTGCCACCGAGAACTTTACAGTGTAAAACA
ACAGTTTTGCATTTTGGAAAGTAAATTATGCAAGCTCCAGGAAGCACTGAAGACCATCTCAGAAAGTTCT
TCCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAACTTACAAATGTGCCTGCCTGCGTTCTGA
TCACCCCTGGAGACTCCAAAGCTGTGCTTCCTCCCACACTGCCACAGCCAGCCAGCCATTTTCCTCCTCC
TCCTCCACCTCCACCTCTGCCACCTCCTCCACCACCACTAGCACCTGTGTTGCTCAGAAAACCCAGTCTC
GCTAAAGCACTTCAGGCTGGACCATTAAAAAAAGATGGACCCATGCAGATAACAGTTAAAGATCTGCTGA
CTGTAAAATTAAAGAAGACACAGAGTTTAGATGAAAAGAGGAAGCTTATACCATCGCCGAAAGCACGGAA
TCCACTAGTTACCGTCTCTGACTTGCAGCATGTTACCCTGAAACCTAACTCCAAAGTGTTATCGACTCGA
GTTACAAACGTCTTAATCACTCCTGGAAAAAGTCAGATGGATCTGCGGAAACTGCTTAGAAAAGTCGATG
TAGAGAGGAGCCCAGGTGGAACCCCTCTTACCAATAAGGAAAATATGGAAACAGGAACAGGACTGACTCC
AGTGATGACGCAGGCCTTAAGGAGAAAGTTTCAGCTGGCTCACCCTAGAAGCCCAACTCCAACTCTGCCA
CTTTCTACAAGCAGCTTTGATGAACAAAACTGA

Translation (360 aa):
MPKFKQRRRKLKAKAERLFKKKEASHFQSKLITPPPPPPSPERVGISSIDISQSRSWLTSSWNFNFPNIR
DAIKLWTNRVWSIYSWCQNCITQSLEVLKDTIFPSRICHRELYSVKQQFCILESKLCKLQEALKTISESS
SCPSCGQTCHMSGKLTNVPACVLITPGDSKAVLPPTLPQPASHFPPPPPPPPLPPPPPPLAPVLLRKPSL
AKALQAGPLKKDGPMQITVKDLLTVKLKKTQSLDEKRKLIPSPKARNPLVTVSDLQHVTLKPNSKVLSTR
VTNVLITPGKSQMDLRKLLRKVDVERSPGGTPLTNKENMETGTGLTPVMTQALRRKFQLAHPRSPTPTLP
LSTSSFDEQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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