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Report for CCDS11966.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
11966.2 |
Public |
Homo sapiens |
18 |
ALPK2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:115701](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:11966.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:115701](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 18 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 11966.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000361673.4 |
ENSP00000354991.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000361673.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000354991.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000361673](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000354991](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_052947.4 |
NP_443179.3 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_052947.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_443179.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_052947](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_443179](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_443179.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_443179.3 |
2170 |
Q86TB3 |
2170 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 11966.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6513 nt): ATGAAAGACTCCGAAGGGCCCCAGAGGCCCCCGCTGTGTTTTTTATCTACATTGCTTTCCCAGAAGGTTC CTGAGAAGTCAGACGCTGTGCTTCGCTGCATAATATCTGGTCAGCCCAAGCCAGAGGTAACTTGGTATAA GAATGGTCAGGCCATCGATGGGAGTGGCATTATTTCCAACTATGAATTCTTTGAGAATCAGTATATTCAT GTGTTACATCTCTCTTGCTGTACCAAAAATGATGCTGCTGTCTATCAAATCTCGGCTAAAAACTCTTTTG GAATGATCTGTTGTTCTGCTTCCGTTGAGGTTGAGTGCTCATCAGAGAACCCACAATTGTCTCCTAACCT GGAAGATGACAGGGACAGGGGTTGGAAACATGAAACAGGGACACATGAAGAAGAAAGGGCAAATCAGATT GATGAGAAGGAACATCCTTATAAGGAAGAAGAAAGCATCTCCCCGGGCACTCCCAGGTCAGCTGACTCCT CCCCCTCCAAATCCAACCATTCACTCTCCCTCCAGTCATTGGGCAATCTTGACATTAGTGTGTCCAGTTC TGAAAATCCTTTGGGTGTTAAAGGAACAAGGCACACTGGAGAGGCTTATGATCCAAGTAACACAGAAGAA ATTGCAAATGGGTTGCTTTTTCTTAATTCAAGTCATATTTATGAAAAACAAGACAGATGTTGCCACAAGA CAGTGCATTCCATGGCATCAAAGTTCACGGATGGTGACCTGAACAATGATGGTCCTCATGATGAAGGCTT ACGCTCTAGTCAGCAAAATCCCAAAGTACAGAAATACATTAGCTTCAGCCTCCCGCTATCTGAGGCAACT GCACACATTTACCCAGGTGACAGTGCCGTGGCCAACAAACAACCCAGCCCACAGCTTTCCAGTGAAGACT CTGACAGTGACTATGAACTTTGCCCAGAGATAACCCTAACCTACACCGAGGAGTTTTCAGATGATGACCT GGAGTATCTGGAATGTTCTGATGTTATGACGGATTACTCTAATGCAGTTTGGCAAAGGAACCTGCTGGGG ACTGAGCATGTTTTTTTATTAGAAAGCGATGACGAAGAGATGGAATTCGGTGAGCATTGCCTGGGTGGGT GTGAGCATTTCCTCAGTGGAATGGGTTGTGGGTCTCGGGTGTCGGGTGACGCTGGGCCTATGGTTGCCAC TGCTGGCTTCTGTGGTCATCACTCACAACCCCAAGAAGTTGGGGTGAGGAGCAGCAGAGTCTCCAAGCAC GGTCCCTCATCCCCACAAACAGGGATGACTCTCATTTTGGGACCTCACCAGGATGGAACGTCTTCAGTGA CAGAACAGGGGAGATATAAACTCCCCACTGCTCCCGAGGCTGCTGAAAATGATTATCCAGGAATTCAAGG AGAAACCAGAGACAGCCACCAAGCAAGAGAGGAATTTGCCAGTGACAATCTGCTCAACATGGATGAATCA GTAAGAGAGACAGAGATGAAGCTCTTGTCTGGTGAGTCAGAAAACTCAGGGATGAGCCAGTGTTGGGAGA CGGCAGCTGACAAGAGAGTGGGGGGAAAGGACTTATGGAGCAAGAGGGGTTCAAGGAAATCTGCCAGGGT GAGGCAGCCGGGAATGAAGGGAAATCCCAAGAAGCCGAATGCCAACCTGAGAGAAAGTACAACAGAAGGT ACCCTTCATCTCTGCTCTGCCAAAGAATCTGCTGAGCCCCCACTAACCCAGAGTGATAAAAGAGAGACTT CTCACACCACAGCAGCAGCGACTGGTCGGAGTTCCCATGCTGATGCAAGAGAATGTGCTATTTCAACCCA GGCAGAGCAAGAAGCAAAAACCCTTCAAACTTCAACAGACTCAGTCTCCAAAGAAGGCAACACAAATTGC AAGGGAGAAGGCATGCAAGTTAATACTCTATTTGAAACAAGCCAGGTTCCAGACTGGAGTGATCCTCCTC AGGTACAAGTTCAGGAAACAGTCAGAGAGACAATCTCTTGCAGCCAGATGCCAGCTTTCTCAGAGCCTGC TGGGGAGGAGTCCCCATTCACTGGGACCACAACAATTTCCTTCTCAAACTTAGGAGGGGTCCACAAGGAA AATGCATCATTAGCTCAACACTCGGAGGTCAAACCCTGTACCTGTGGTCCACAGCATGAAGAAAAACAAG ACAGAGATGGCAACATACCTGACAATTTCAGGGAAGACCTAAAATATGAGCAGAGCATCTCAGAAGCCAA TGATGAGACTATGTCCCCAGGTGTGTTCTCAAGGCATCTCCCCAAGGATGCTCGTGCTGACTTCAGGGAG CCTGTGGCTGTCTCTGTTGCTTCCCCTGAACCCACAGATACTGCCCTCACCCTGGAAAATGTGTGTGATG AGCCAAGGGACAGAGAAGCAGTGTGTGCAATGGAGTGTTTTGAGGCTGGTGACCAAGGAACGTGTTTTGA TACCATAGATTCTCTTGTTGGGAGACCAGTTGATAAATATTCGCCTCAAGAAATTTGCTCTGTAGATACG GAACTGGCAGAAGGTCAAAACAAAGTATCTGATTTATGTTCTTCTAATGACAAGACACTGGAAGTCTTTT TTCAGACACAAGTGTCTGAGACTTCAGTGTCTACGTGCAAAAGCAGCAAGGACGGCAACTCAGTCATGTC CCCTCTTTTTACCAGTACTTTCACCTTGAACATTTCACACACAGCTAGTGAAGGTGCCACAGGAGAAAAT CTAGCCAAGGTGGAGAATTCCACCTACCCACTGGCCTCCACAGTACATGCTGGCCAGGAGCAGCCAAGCC CCAGCAACTCAGGAGGGCTTGATGAAACACAGCTCCTTTCTTCTGAGAACAATCCTTTAGTGCAATTTAA AGAAGGAGGTGACAAGAGCCCCAGTCCTAGTGCCGCAGACACCACAGCCACACCAGCCAGTTATAGTTCA ATTGTGAGTTTTCCTTGGGAGAAGCCAACAACATTAACTGCTAATAATGAGTGCTTTCAAGCGACCAGGG AGACTGAGGACACATCAACTGTTACCATTGCCACCGAAGTCCACCCAGCCAAATACCTTGCTGTGTCAAT TCCTGAGGACAAGCATGCAGGTGGCACTGAGGAGAGGTTCCCTCGTGCATCCCATGAAAAGGTTTCCCAA TTTCCTTCCCAAGTGCAGTTGGATCATATTTTAAGTGGTGCTACCATCAAATCTACAAAAGAGCTACTTT GCAGGGCACCCAGTGTGCCAGGAGTCCCACACCATGTCCTGCAGCTCCCAGAGGGAGAGGGTTTCTGCAG TAATTCCCCTCTTCAGGTTGATAACCTGTCTGGAGATAAGAGCCAGACTGTGGACAGAGCAGACTTTAGG AGCTATGAAGAGAATTTCCAAGAAAGAGGAAGTGAAACAAAGCAGGGGGTCCAGCAGCAGAGCCTGTCCC AGCAGGGTTCTCTTTCTGCACCTGATTTCCAACAAAGTTTGCCTACGACATCTGCTGCACAAGAGGAAAG AAACTTGGTGCCCACGGCCCACTCACCCGCAAGCTCTAGGGAAGGAGCAGGGCAGCGCTCAGGTTGGGGG ACGAGGGTCTCCGTGGTGGCTGAAACTGCTGGGGAAGAAGACAGTCAGGCTCTGAGCAACGTTCCATCTC TCTCTGATATCCTTTTGGAAGAGTCTAAAGAATATAGACCTGGAAATTGGGAGGCAGGCAACAAGCTGAA GATTATAACTCTAGAGGCTTCCGCTTCTGAAATCTGGCCACCACGACAACTGACAAATTCTGAGAGCAAG GCATCAGACGGTGGTCTCATAATTCCTGACAAGGTCTGGGCTGTACCTGATAGTCTAAAGGCAGATGCTG TTGTGCCTGAATTGGCCCCCTCTGAAATAGCAGCATTGGCTCACAGTCCAGAGGATGCTGAGTCAGCCCT TGCTGATAGCAGAGAAAGCCATAAAGGCGAAGAGCCCACCATCAGTGTACATTGGAGAAGTCTTTCTTCC CGGGGTTTCAGCCAACCCAGACTCCTGGAGTCATCCGTGGACCCTGTAGATGAAAAGGAGTTATCTGTCA CAGATTCACTGTCAGCGGCTTCTGAAACTGGAGGGAAGGAAAATGTTAACAATGTGAGTCAAGACCAGGA GGAAAAACAACTCAAGATGGATCACACTGCCTTCTTTAAAAAGTTTCTGACCTGCCCTAAAATCCTAGAG TCCTCTGTAGATCCCATTGATGAGATAAGTGTGATAGAGTACACCAGGGCTGGAAAACCAGAGCCCTCTG AAACCACACCACAGGGCGCCAGAGAAGGGGGTCAATCAAATGACGGAAACATGGGCCACGAAGCGGAAAT CCAGCCGGCCATTTTGCAAGTTCCATGTCTCCAGGGAACCATTCTGAGTGAAAATAGAATCAGCAGAAGC CAAGAAGGCAGTATGAAGCAGGAGGCTGAACAAATTCAACCTGAGGAGGCAAAAACTGCCATTTGGCAAG TCCTGCAACCCAGCGAAGGCGGTGAAAGAATTCCAAGTGGATGTAGCATAGGCCAAATACAAGAAAGCAG TGATGGGAGCTTAGGGGAGGCTGAGCAAAGCAAAAAGGACAAAGCAGAATTGATTTCCCCCACTTCACCT CTTTCTAGTTGTCTTCCAATAATGACTCACGCTTCTCTTGGGGTTGACACGCACAACTCCACAGGCCAAA TTCATGACGTCCCTGAAAATGACATAGTTGAGCCCAGAAAGCGTCAGTATGTGTTTCCTGTTTCACAGAA AAGGGGAACTATTGAGAATGAGCGTGGGAAACCTTTGCCCTCTTCTCCTGATCTTACCAGGTTCCCTTGT ACTTCATCTCCTGAAGGAAATGTCACAGACTTTTTGATAAGCCACAAAATGGAGGAACCTAAAATAGAGG TGCTTCAAATTGGGGAAACCAAACCCCCAAGCTCATCTAGCTCCTCAGCGAAGACCTTGGCATTTATTTC AGGAGAACGTGAGTTAGAGAAAGCCCCTAAATTACTGCAGGATCCATGTCAAAAGGGCACCCTGGGCTGT GCGAAAAAGTCCAGGGAGAGAGAGAAGTCCCTGGAAGCCCGAGCAGGCAAATCGCCAGGGACCCTCACAG CAGTGACGGGGTCAGAGGAGGTCAAGAGGAAGCCAGAAGCCCCAGGCAGTGGACATTTAGCTGAGGGAGT AAAGAAGAAAATTTTGTCCAGGGTGGCAGCACTGAGGCTGAAACTGGAAGAAAAGGAAAATATCAGAAAG AACTCAGCCTTTCTTAAAAAGATGCCCAAACTCGAAACATCATTATCACACACAGAAGAGAAACAAGACC CAAAAAAGCCATCTTGCAAAAGAGAAGGAAGAGCTCCAGTATTACTGAAAAAGATCCAAGCTGAGATGTT CCCTGAACACTCTGGAAATGTAAAATTAAGCTGCCAATTTGCAGAAATTCATGAAGATTCTACTATCTGC TGGACAAAAGATTCAAAGTCCATAGCCCAAGTGCAGAGAAGTGCAGGGGACAACTCCACTGTTTCCTTTG CCATCGTGCAAGCCAGTCCGAAGGACCAGGGACTCTATTACTGCTGCATCAAGAACAGCTACGGAAAAGT GACTGCTGAATTTAACCTCACAGCTGAAGTTCTCAAACAGCTGTCAAGTCGCCAGGATACTAAAGGATGT GAAGAGATTGAATTCAGCCAACTCATCTTCAAAGAAGACTTCCTCCATGACAGCTACTTTGGGGGCCGCC TGCGTGGTCAGATCGCCACGGAGGAGCTGCACTTTGGAGAAGGGGTTCACCGCAAAGCCTTCCGCAGCAC AGTGATGCACGGCCTCATGCCTGTCTTCAAACCTGGCCATGCCTGTGTGCTTAAGGTGCACAATGCCATT GCCTATGGGACCAGAAATAATGATGAGCTCATCCAAAGGAACTACAAACTCGCTGCCCAGGAATGCTATG TTCAAAATACTGCCAGGTATTATGCCAAGATCTACGCTGCTGAAGCACAGCCTCTGGAAGGCTTTGGAGA AGTACCTGAGATCATTCCTATTTTTCTTATCCATCGGCCTGAGAACAATATCCCGTATGCTACAGTGGAG GAGGAGCTGATTGGAGAATTTGTGAAGTATTCCATCAGGGATGGGAAAGAAATAAACTTCTTGAGAAGAG AATCAGAAGCTGGTCAGAAATGTTGCACCTTCCAGCACTGGGTGTACCAGAAAACAAGTGGCTGCCTCCT GGTGACGGACATGCAAGGTGTAGGAATGAAGCTAACTGACGTTGGCATAGCAACGCTGGCTAAAGGGTAC AAGGGATTTAAAGGCAACTGTTCCATGACCTTCATTGATCAGTTTAAAGCACTACACCAGTGTAACAAGT ATTGCAAAATGCTGGGACTGAAATCCCTTCAAAACAACAACCAGAAACAGAAGCAGCCGAGCATTGGGAA AAGCAAAGTTCAAACAAACTCTATGACAATAAAGAAGGCAGGGCCTGAGACCCCAGGCGAAAAGAAAACC TAA
Translation (2170 aa): MKDSEGPQRPPLCFLSTLLSQKVPEKSDAVLRCIISGQPKPEVTWYKNGQAIDGSGIISNYEFFENQYIH VLHLSCCTKNDAAVYQISAKNSFGMICCSASVEVECSSENPQLSPNLEDDRDRGWKHETGTHEEERANQI DEKEHPYKEEESISPGTPRSADSSPSKSNHSLSLQSLGNLDISVSSSENPLGVKGTRHTGEAYDPSNTEE IANGLLFLNSSHIYEKQDRCCHKTVHSMASKFTDGDLNNDGPHDEGLRSSQQNPKVQKYISFSLPLSEAT AHIYPGDSAVANKQPSPQLSSEDSDSDYELCPEITLTYTEEFSDDDLEYLECSDVMTDYSNAVWQRNLLG TEHVFLLESDDEEMEFGEHCLGGCEHFLSGMGCGSRVSGDAGPMVATAGFCGHHSQPQEVGVRSSRVSKH GPSSPQTGMTLILGPHQDGTSSVTEQGRYKLPTAPEAAENDYPGIQGETRDSHQAREEFASDNLLNMDES VRETEMKLLSGESENSGMSQCWETAADKRVGGKDLWSKRGSRKSARVRQPGMKGNPKKPNANLRESTTEG TLHLCSAKESAEPPLTQSDKRETSHTTAAATGRSSHADARECAISTQAEQEAKTLQTSTDSVSKEGNTNC KGEGMQVNTLFETSQVPDWSDPPQVQVQETVRETISCSQMPAFSEPAGEESPFTGTTTISFSNLGGVHKE NASLAQHSEVKPCTCGPQHEEKQDRDGNIPDNFREDLKYEQSISEANDETMSPGVFSRHLPKDARADFRE PVAVSVASPEPTDTALTLENVCDEPRDREAVCAMECFEAGDQGTCFDTIDSLVGRPVDKYSPQEICSVDT ELAEGQNKVSDLCSSNDKTLEVFFQTQVSETSVSTCKSSKDGNSVMSPLFTSTFTLNISHTASEGATGEN LAKVENSTYPLASTVHAGQEQPSPSNSGGLDETQLLSSENNPLVQFKEGGDKSPSPSAADTTATPASYSS IVSFPWEKPTTLTANNECFQATRETEDTSTVTIATEVHPAKYLAVSIPEDKHAGGTEERFPRASHEKVSQ FPSQVQLDHILSGATIKSTKELLCRAPSVPGVPHHVLQLPEGEGFCSNSPLQVDNLSGDKSQTVDRADFR SYEENFQERGSETKQGVQQQSLSQQGSLSAPDFQQSLPTTSAAQEERNLVPTAHSPASSREGAGQRSGWG TRVSVVAETAGEEDSQALSNVPSLSDILLEESKEYRPGNWEAGNKLKIITLEASASEIWPPRQLTNSESK ASDGGLIIPDKVWAVPDSLKADAVVPELAPSEIAALAHSPEDAESALADSRESHKGEEPTISVHWRSLSS RGFSQPRLLESSVDPVDEKELSVTDSLSAASETGGKENVNNVSQDQEEKQLKMDHTAFFKKFLTCPKILE SSVDPIDEISVIEYTRAGKPEPSETTPQGAREGGQSNDGNMGHEAEIQPAILQVPCLQGTILSENRISRS QEGSMKQEAEQIQPEEAKTAIWQVLQPSEGGERIPSGCSIGQIQESSDGSLGEAEQSKKDKAELISPTSP LSSCLPIMTHASLGVDTHNSTGQIHDVPENDIVEPRKRQYVFPVSQKRGTIENERGKPLPSSPDLTRFPC TSSPEGNVTDFLISHKMEEPKIEVLQIGETKPPSSSSSSAKTLAFISGERELEKAPKLLQDPCQKGTLGC AKKSREREKSLEARAGKSPGTLTAVTGSEEVKRKPEAPGSGHLAEGVKKKILSRVAALRLKLEEKENIRK NSAFLKKMPKLETSLSHTEEKQDPKKPSCKREGRAPVLLKKIQAEMFPEHSGNVKLSCQFAEIHEDSTIC WTKDSKSIAQVQRSAGDNSTVSFAIVQASPKDQGLYYCCIKNSYGKVTAEFNLTAEVLKQLSSRQDTKGC EEIEFSQLIFKEDFLHDSYFGGRLRGQIATEELHFGEGVHRKAFRSTVMHGLMPVFKPGHACVLKVHNAI AYGTRNNDELIQRNYKLAAQECYVQNTARYYAKIYAAEAQPLEGFGEVPEIIPIFLIHRPENNIPYATVE EELIGEFVKYSIRDGKEINFLRRESEAGQKCCTFQHWVYQKTSGCLLVTDMQGVGMKLTDVGIATLAKGY KGFKGNCSMTFIDQFKALHQCNKYCKMLGLKSLQNNNQKQKQPSIGKSKVQTNSMTIKKAGPETPGEKKT
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