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Report for CCDS11991.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
11991.1 |
Public |
Homo sapiens |
18 |
SERPINB8 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:5271](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:11991.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:5271](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 18 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 11991.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000353706.6 |
ENSP00000331368.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000353706.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000331368.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000353706](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000331368](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000397985.7 |
ENSP00000381072.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000397985.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000381072.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000397985](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000381072](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001366198.1 |
NP_001353127.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001366198.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001353127.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001366198](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001353127](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001353127.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_002640.4 |
NP_002631.3 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_002640.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_002631.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_002640](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_002631](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_002631.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_198833.2 |
NP_942130.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_198833.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_942130.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_198833](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_942130](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_942130.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 11991.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1125 nt): ATGGATGACCTCTGTGAAGCAAATGGCACTTTTGCCATCAGCTTATTTAAAATATTGGGGGAAGAGGACA ACTCAAGAAACGTATTCTTCTCTCCCATGAGCATCTCCTCTGCCCTGGCCATGGTCTTCATGGGGGCAAA GGGAAGCACTGCAGCCCAGATGTCCCAGGCACTTTGTTTATACAAAGACGGAGATATTCACCGAGGTTTC CAGTCACTTCTCAGTGAAGTTAACAGAACTGGCACTCAGTACTTGCTTAGAACTGCCAACAGACTCTTTG GAGAAAAGACGTGTGATTTCCTTCCAGACTTTAAAGAATACTGTCAGAAGTTCTATCAGGCAGAGCTGGA GGAGTTGTCCTTTGCTGAAGACACTGAAGAGTGCAGGAAGCATATAAATGACTGGGTGGCAGAGAAGACT GAAGGTAAGATTTCAGAGGTACTGGATGCTGGGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGAATG CCATTTATTTCAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTACACAAGGGGAATGCTCTTTAAAAC CAACGAGGAAAAAAAGACAGTGCAGATGATGTTTAAGGAAGCTAAGTTTAAAATGGGGTATGCGGATGAG GTACACACCCAGGTCCTGGAGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG ACAACACGGACCTCGCCGTGGTGGAAAAAGCACTTACATATGAGAAATTCAAAGCCTGGACAAATTCAGA AAAGTTGACAAAAAGTAAGGTTCAAGTTTTCCTTCCCAGATTAAAGCTGGAGGAGAGTTATGACTTGGAG CCTTTCCTTCGAAGATTAGGAATGATCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATGTCAA CTGAGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGTCAATGAGGAAGGCACAGA GGCTGCCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGAC CACCCTTTTCTTTTCTTCATCAGGCACCACAAAACCAACTGCATCTTGTTCTGTGGCAGGTTCTCTTCTC CGTAA
Translation (374 aa): MDDLCEANGTFAISLFKILGEEDNSRNVFFSPMSISSALAMVFMGAKGSTAAQMSQALCLYKDGDIHRGF QSLLSEVNRTGTQYLLRTANRLFGEKTCDFLPDFKEYCQKFYQAELEELSFAEDTEECRKHINDWVAEKT EGKISEVLDAGTVDPLTKLVLVNAIYFKGKWNEQFDRKYTRGMLFKTNEEKKTVQMMFKEAKFKMGYADE VHTQVLELPYVEEELSMVILLPDDNTDLAVVEKALTYEKFKAWTNSEKLTKSKVQVFLPRLKLEESYDLE PFLRRLGMIDAFDEAKADFSGMSTEKNVPLSKVAHKCFVEVNEEGTEAAAATAVVRNSRCSRMEPRFCAD HPFLFFIRHHKTNCILFCGRFSSP
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