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Report for CCDS12052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12052.1 Public Homo sapiens 19 TMEM259 24 110 108 CCDS HistoryNCBI Gene:91304Re-query CCDS DB by CCDS ID:12052.1Re-query CCDS DB by GeneID:91304See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333175.9 ENSP00000331423.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333175.9Link to Ensembl Protein Viewer:ENSP00000331423.4Re-query CCDS DB by Nucleotide ID:ENST00000333175Re-query CCDS DB by Protein ID:ENSP00000331423
Original member Current member NCBI NM_033420.4 NP_219488.1 Accepted alive Link to Nucleotide Sequence:NM_033420.4Link to Protein Sequence:NP_219488.1Re-query CCDS DB by Nucleotide ID:NM_033420Re-query CCDS DB by Protein ID:NP_219488Link to BLAST:NP_219488.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_219488.1 408 Q4ZIN3-2 408 100% 0 0

Chromosomal Locations for CCDS 12052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1010886 1010895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1011367 1011499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1011580 1011663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1011741 1011798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1011892 1011992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1012066 1012188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1012463 1012573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1013241 1013340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1014192 1014473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1020772 1020996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGTCGGAGCACGTGGAGCCCGCAGCTCCGGGGCCCGGGCCCAACGGCGGCGGCGGCGGCCCGGCCCCCG
CGCGCGGGCCTCGCACCCCCAATCTCAACCCCAACCCCCTCATCAACGTGCGCGACCGGCTCTTCCACGC
GCTGTTCTTCAAGATGGCTGTCACCTATTCGCGGCTCTTCCCGCCCGCCTTCCGCCGTCTCTTCGAGTTC
TTCGTGCTGCTCAAGGCCCTGTTTGTGCTCTTCGTCCTGGCCTACATCCACATCGTCTTCTCCCGCTCGC
CCATCAACTGCCTGGAGCATGTGCGTGACAAGTGGCCGCGTGAGGGCATCCTGCGTGTGGAAGTGCGGCA
CAACTCGAGCCGCGCGCCCGTCTTCCTACAGTTCTGTGACAGCGGCGGCCGCGGGAGCTTCCCGGGCCTG
GCCGTGGAACCAGGCAGCAACCTGGACATGGAAGATGAGGAGGAGGAAGAGCTGACCATGGAGATGTTTG
GGAACAGCTCCATCAAGTTTGAGCTGGACATCGAGCCCAAGGTGTTCAAGCCGCCGAGTAGCACAGAGGC
CCTGAATGACAGCCAGGAGTTCCCCTTCCCCGAGACGCCCACCAAAGTGTGGCCGCAGGACGAGTACATC
GTGGAGTACTCACTAGAGTATGGCTTCCTTCGCCTGTCGCAGGCCACCCGCCAGCGCCTGAGCATCCCCG
TCATGGTGGTCACCCTGGACCCCACGCGGGACCAGTGCTTCGGGGACCGCTTCAGCCGCCTGCTGCTGGA
TGAGTTCCTGGGCTACGATGACATCCTCATGTCCAGCGTGAAGGGCCTGGCCGAGAACGAGGAGAACAAG
GGCTTCCTGCGGAATGTGGTGTCGGGCGAGCACTACCGCTTTGTGAGCATGTGGATGGCGCGGACGTCCT
ACCTGGCCGCCTTCGCCATCATGGTCATCTTCACGCTGAGCGTGTCCATGCTGCTGCGGTACTCACACCA
CCAGATCTTCGTCTTCATCGTGGACCTGCTGCAGATGCTGGAGATGAACATGGCCATCGCCTTCCCCGCA
GCGCCCCTGCTGACCGTCATCCTGGCCCTCGTCGGGATGGAGGCCATCATGTCGGAGTTCTTCAACGACA
CCACCACCGCCTTCTACATCATCCTCATCGTGTGGCTCGCGGACCAGTATGACGCCATCTGCTGCCACAC
CAGCACCAGCAAGCGGCATTGGCTGCGCATTCCATGA

Translation (408 aa):
MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLFPPAFRRLFEF
FVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSSRAPVFLQFCDSGGRGSFPGL
AVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFKPPSSTEALNDSQEFPFPETPTKVWPQDEYI
VEYSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENK
GFLRNVVSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPA
APLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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