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Report for CCDS12147.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12147.1 |
Public |
Homo sapiens |
19 |
RPL36 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:25873](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12147.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:25873](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12147.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000347512.8 |
ENSP00000252543.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000347512.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000252543.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000347512](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000252543](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000394580.2 |
ENSP00000378081.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000394580.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000378081.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000394580](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000378081](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000579649.5 |
ENSP00000462609.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000579649.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000462609.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000579649](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000462609](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000577222.5 |
ENSP00000464342.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000577222.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000464342.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000577222](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000464342](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015414.4 |
NP_056229.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015414.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_056229.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015414](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_056229](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_056229.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_033643.3 |
NP_378669.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_033643.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_378669.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_033643](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_378669](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_378669.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12147.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (318 nt): ATGGCCCTACGCTACCCTATGGCCGTGGGCCTCAACAAGGGCCACAAAGTGACCAAGAACGTGAGCAAGC CCAGGCACAGCCGACGCCGCGGGCGTCTGACCAAACACACCAAGTTCGTGCGGGACATGATTCGGGAGGT GTGTGGCTTTGCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAGGTCTCCAAGGACAAACGGGCCCTC AAATTTATCAAGAAAAGGGTGGGGACGCACATCCGCGCCAAGAGGAAGCGGGAGGAGCTGAGCAACGTAC TGGCCGCCATGAGGAAAGCTGCTGCCAAGAAAGACTGA
Translation (105 aa): MALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRAL KFIKKRVGTHIRAKRKREELSNVLAAMRKAAAKKD
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