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Report for CCDS12155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12155.1 Public Homo sapiens 19 NDUFA11 24 110 108 CCDS HistoryNCBI Gene:126328Re-query CCDS DB by CCDS ID:12155.1Re-query CCDS DB by GeneID:126328See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308961.5 ENSP00000311740.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308961.5Link to Ensembl Protein Viewer:ENSP00000311740.4Re-query CCDS DB by Nucleotide ID:ENST00000308961Re-query CCDS DB by Protein ID:ENSP00000311740
Original member Current member NCBI NM_175614.5 NP_783313.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175614.5Link to Protein Sequence:NP_783313.1Re-query CCDS DB by Nucleotide ID:NM_175614Re-query CCDS DB by Protein ID:NP_783313Link to BLAST:NP_783313.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783313.1 141 Q86Y39-1 141 100% 0 0

Chromosomal Locations for CCDS 12155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5894742 5894854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5896453 5896575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5896905 5896997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5903612 5903708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (426 nt):
ATGGCGCCGAAGGTTTTTCGTCAGTACTGGGATATCCCCGATGGCACCGATTGCCACCGCAAAGCCTACA
GCACCACCAGTATTGCCAGCGTCGCTGGCCTGACCGCCGCTGCCTACAGAGTCACACTCAATCCTCCGGG
CACCTTCCTTGAAGGAGTGGCTAAGGTTGGACAATACACGTTCACTGCAGCTGCTGTCGGGGCCGTGTTT
GGCCTCACCACCTGCATCAGCGCCCATGTCCGCGAGAAGCCCGACGACCCCCTGAACTACTTCCTCGGTG
GCTGCGCCGGAGGCCTGACTCTGGGAGCACGCACGCACAACTACGGGATTGGCGCCGCCGCCTGCGTGTA
CTTTGGCATAGCGGCCTCCCTGGTCAAGATGGGCCGGCTGGAGGGCTGGGAGGTGTTTGCAAAACCCAAG
GTGTGA

Translation (141 aa):
MAPKVFRQYWDIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLNPPGTFLEGVAKVGQYTFTAAAVGAVF
GLTTCISAHVREKPDDPLNYFLGGCAGGLTLGARTHNYGIGAAACVYFGIAASLVKMGRLEGWEVFAKPK
V


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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