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Report for CCDS12227.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12227.1 Public Homo sapiens 19 EIF3G 24 110 108 CCDS HistoryNCBI Gene:8666Re-query CCDS DB by CCDS ID:12227.1Re-query CCDS DB by GeneID:8666See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12227.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253108.9 ENSP00000253108.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253108.9Link to Ensembl Protein Viewer:ENSP00000253108.3Re-query CCDS DB by Nucleotide ID:ENST00000253108Re-query CCDS DB by Protein ID:ENSP00000253108
Original member Current member NCBI NM_003755.5 NP_003746.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003755.5Link to Protein Sequence:NP_003746.2Re-query CCDS DB by Nucleotide ID:NM_003755Re-query CCDS DB by Protein ID:NP_003746Link to BLAST:NP_003746.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003746.2 320 O75821 320 100% 0 0

Chromosomal Locations for CCDS 12227.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 10115114 10115129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10115479 10115585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10115684 10115820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10115967 10116074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10116800 10116989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10117084 10117188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10118668 10118727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10118868 10118956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10119088 10119171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10119654 10119700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10119840 10119859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGCCTACTGGAGACTTTGATTCGAAGCCCAGTTGGGCCGACCAGGTGGAGGAGGAGGGGGAGGACGACA
AATGTGTCACCAGCGAGCTCCTCAAGGGGATCCCTCTGGCCACAGGTGACACCAGCCCAGAGCCAGAGCT
ACTGCCGGGAGCTCCACTGCCGCCTCCCAAGGAGGTCATCAACGGAAACATAAAGACAGTGACAGAGTAC
AAGATAGATGAGGATGGCAAGAAGTTCAAGATTGTCCGCACCTTCAGGATTGAGACCCGGAAGGCTTCAA
AGGCTGTCGCAAGGAGGAAGAACTGGAAGAAGTTCGGGAACTCAGAGTTTGACCCCCCCGGACCCAATGT
GGCCACCACCACTGTCAGTGACGATGTCTCTATGACGTTCATCACCAGCAAAGAGGACCTGAACTGCCAG
GAGGAGGAGGACCCTATGAACAAACTCAAGGGCCAGAAGATCGTGTCCTGCCGCATCTGCAAGGGCGACC
ACTGGACCACCCGCTGCCCCTACAAGGATACGCTGGGGCCCATGCAGAAGGAGCTGGCCGAGCAGCTGGG
CCTGTCTACTGGCGAGAAGGAGAAGCTGCCGGGAGAGCTAGAGCCGGTGCAGGCCACGCAGAACAAGACA
GGGAAGTATGTGCCGCCGAGCCTGCGCGACGGGGCCAGCCGCCGCGGGGAGTCCATGCAGCCCAACCGCA
GAGCCGACGACAACGCCACCATCCGTGTCACCAACTTGTCAGAGGACACGCGTGAGACCGACCTGCAGGA
GCTCTTCCGGCCTTTCGGCTCCATCTCCCGCATCTACCTGGCTAAGGACAAGACCACTGGCCAATCCAAG
GGCTTTGCCTTCATCAGCTTCCACCGCCGCGAGGATGCTGCGCGTGCCATTGCCGGGGTGTCCGGCTTTG
GCTACGACCACCTCATCCTCAACGTCGAGTGGGCCAAGCCGTCCACCAACTAA

Translation (320 aa):
MPTGDFDSKPSWADQVEEEGEDDKCVTSELLKGIPLATGDTSPEPELLPGAPLPPPKEVINGNIKTVTEY
KIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQ
EEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKT
GKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK
GFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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