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Report for CCDS12310.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12310.1 |
Public |
Homo sapiens |
19 |
GIPC1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:10755](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12310.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:10755](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12310.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000345425.6 |
ENSP00000340698.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000345425.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000340698.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000345425](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000340698](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000393033.9 |
ENSP00000376753.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000393033.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000376753.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000393033](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000376753](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000586027.5 |
ENSP00000466747.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000586027.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000466747.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000586027](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000466747](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_005716.4 |
NP_005707.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_005716.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_005707.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_005716](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_005707](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_005707.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_202468.3 |
NP_974197.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_202468.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_974197.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_202468](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_974197](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_974197.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_202470.3 |
NP_974199.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_202470.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_974199.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_202470](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_974199](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_974199.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12310.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1002 nt): ATGCCGCTGGGACTGGGGCGGCGGAAAAAGGCGCCCCCTCTAGTGGAAAATGAGGAGGCTGAGCCAGGCC GTGGAGGGCTGGGCGTGGGGGAGCCAGGGCCTCTGGGCGGAGGTGGGTCGGGGGGCCCCCAAATGGGCTT GCCCCCCCCTCCCCCAGCCCTGCGGCCCCGCCTCGTGTTCCACACCCAGCTGGCCCATGGCAGTCCCACT GGCCGCATCGAGGGCTTCACCAACGTCAAGGAGCTGTATGGCAAGATCGCCGAGGCCTTCCGCCTGCCAA CTGCCGAGGTGATGTTCTGCACCCTGAACACCCACAAAGTGGACATGGACAAGCTCCTGGGGGGCCAGAT CGGGCTGGAGGACTTCATCTTCGCCCACGTGAAGGGGCAGCGCAAGGAGGTGGAGGTGTTCAAGTCGGAG GATGCACTCGGGCTCACCATCACGGACAACGGGGCTGGCTACGCCTTCATCAAGCGCATCAAGGAGGGCA GCGTGATCGACCACATCCACCTCATCAGCGTGGGCGACATGATCGAGGCCATTAACGGGCAGAGCCTGCT GGGCTGCCGGCACTACGAGGTGGCCCGGCTGCTCAAGGAGCTGCCCCGAGGCCGTACCTTCACGCTGAAG CTCACGGAGCCTCGCAAGGCCTTCGACATGATCAGCCAGCGTTCAGCGGGTGGCCGCCCTGGCTCTGGCC CACAACTGGGCACTGGCCGAGGGACCCTGCGGCTCCGATCCCGGGGCCCCGCCACGGTGGAGGATCTGCC CTCTGCCTTTGAAGAGAAGGCCATTGAGAAGGTGGATGACCTGCTGGAGAGTTACATGGGTATCAGGGAC ACGGAGCTGGCGGCCACCATGGTGGAGCTGGGAAAGGACAAAAGGAACCCGGATGAGCTGGCCGAGGCCC TGGACGAACGGCTGGGTGACTTTGCCTTCCCTGACGAGTTCGTCTTTGACGTCTGGGGCGCCATTGGGGA CGCCAAGGTCGGCCGCTACTAG
Translation (333 aa): MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVFHTQLAHGSPT GRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSE DALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLK LTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRD TELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
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