NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12331.1 Public Homo sapiens 19 CYP4F22 24 110 108 CCDS HistoryNCBI Gene:126410Re-query CCDS DB by CCDS ID:12331.1Re-query CCDS DB by GeneID:126410See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269703.8 ENSP00000269703.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269703.8Link to Ensembl Protein Viewer:ENSP00000269703.1Re-query CCDS DB by Nucleotide ID:ENST00000269703Re-query CCDS DB by Protein ID:ENSP00000269703
Original member Current member EBI ENST00000601005.2 ENSP00000469866.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601005.2Link to Ensembl Protein Viewer:ENSP00000469866.1Re-query CCDS DB by Nucleotide ID:ENST00000601005Re-query CCDS DB by Protein ID:ENSP00000469866
Original member Current member NCBI NM_173483.4 NP_775754.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173483.4Link to Protein Sequence:NP_775754.2Re-query CCDS DB by Nucleotide ID:NM_173483Re-query CCDS DB by Protein ID:NP_775754Link to BLAST:NP_775754.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775754.2 531 Q6NT55 531 100% 0 0

Chromosomal Locations for CCDS 12331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15525337 15525558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15529709 15529853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15537361 15537414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15537535 15537662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15537872 15537993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15540450 15540717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15543971 15544037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15544150 15544279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15548108 15548241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15549138 15549202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15550674 15550756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15551294 15551471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGCTGCCCATCACAGACCGCCTGCTGCACCTCCTGGGGCTGGAGAAGACGGCGTTCCGCATATACGCGG
TGTCCACCCTTCTCCTCTTCCTGCTCTTCTTCCTGTTCCGCCTGCTGCTGCGGTTCCTGAGGCTCTGCAG
GAGCTTCTACATCACCTGCCGCCGGCTGCGCTGCTTCCCCCAGCCTCCCCGGCGCAACTGGCTGCTGGGC
CACCTGGGCATGTACCTTCCAAATGAGGCGGGCCTTCAAGATGAGAAGAAGGTACTGGACAACATGCACC
ATGTACTCTTGGTATGGATGGGACCTGTCCTGCCGCTGTTGGTTCTGGTGCACCCTGATTACATCAAACC
CCTTTTGGGAGCCTCAGCTGCCATCGCCCCCAAGGATGACCTCTTCTATGGCTTCCTAAAACCTTGGCTA
GGGGATGGGCTGCTGCTCAGCAAAGGTGACAAGTGGAGCCGGCACCGTCGCCTGCTGACACCCGCCTTCC
ACTTTGACATCCTGAAGCCTTACATGAAGATCTTCAACCAGAGCGCTGACATTATGCATGCTAAATGGCG
GCATCTGGCAGAGGGCTCAGCGGTCTCCCTTGATATGTTTGAGCATATCAGCCTCATGACCCTGGACAGT
CTTCAGAAATGTGTCTTCAGCTACAACAGCAACTGCCAAGAGAAGATGAGTGATTATATCTCCGCTATCA
TTGAACTGAGCGCTCTGTCTGTCCGGCGCCAGTATCGCTTGCACCACTACCTCGACTTCATTTACTACCG
CTCGGCGGATGGGCGGAGGTTCCGGCAGGCCTGTGACATGGTGCACCACTTCACCACTGAAGTCATCCAG
GAACGGCGGCGGGCACTGCGTCAGCAGGGGGCCGAGGCCTGGCTTAAGGCCAAGCAGGGGAAGACCTTGG
ACTTTATTGATGTGCTGCTCCTGGCCAGGGATGAAGATGGAAAGGAACTGTCAGACGAGGATATCCGAGC
CGAAGCAGACACCTTCATGTTTGAGGGTCACGACACAACATCCAGTGGGATCTCTTGGATGCTGTTCAAT
TTGGCAAAGTATCCGGAATACCAGGAGAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGGCCGGGAGC
TGGAGGAGCTGGAGTGGGACGATCTGACTCAGCTGCCCTTTACAACTATGTGCATTAAGGAGAGCCTGCG
CCAGTACCCACCTGTCACTCTTGTCTCTCGCCAATGCACGGAGGACATCAAGCTCCCAGATGGGCGCATC
ATCCCCAAAGGAATCATCTGCTTGGTCAGCATCTATGGAACCCACCACAACCCCACAGTGTGGCCTGACT
CCAAGGTGTACAACCCCTACCGCTTTGACCCGGACAACCCACAGCAGCGCTCTCCACTGGCCTATGTGCC
CTTCTCTGCAGGACCCAGGAATTGCATCGGACAGAGCTTCGCCATGGCCGAGTTGCGCGTGGTTGTGGCA
CTAACACTGCTACGTTTCCGCCTGAGCGTGGACCGAACGCGCAAGGTGCGGCGGAAGCCGGAGCTCATAC
TGCGCACGGAGAACGGGCTCTGGCTCAAGGTGGAGCCGCTGCCTCCGCGGGCCTGA

Translation (531 aa):
MLPITDRLLHLLGLEKTAFRIYAVSTLLLFLLFFLFRLLLRFLRLCRSFYITCRRLRCFPQPPRRNWLLG
HLGMYLPNEAGLQDEKKVLDNMHHVLLVWMGPVLPLLVLVHPDYIKPLLGASAAIAPKDDLFYGFLKPWL
GDGLLLSKGDKWSRHRRLLTPAFHFDILKPYMKIFNQSADIMHAKWRHLAEGSAVSLDMFEHISLMTLDS
LQKCVFSYNSNCQEKMSDYISAIIELSALSVRRQYRLHHYLDFIYYRSADGRRFRQACDMVHHFTTEVIQ
ERRRALRQQGAEAWLKAKQGKTLDFIDVLLLARDEDGKELSDEDIRAEADTFMFEGHDTTSSGISWMLFN
LAKYPEYQEKCREEIQEVMKGRELEELEWDDLTQLPFTTMCIKESLRQYPPVTLVSRQCTEDIKLPDGRI
IPKGIICLVSIYGTHHNPTVWPDSKVYNPYRFDPDNPQQRSPLAYVPFSAGPRNCIGQSFAMAELRVVVA
LTLLRFRLSVDRTRKVRRKPELILRTENGLWLKVEPLPPRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH