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Report for CCDS12495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12495.1 Public Homo sapiens 19 ZNF567 24 110 108 CCDS HistoryNCBI Gene:163081Re-query CCDS DB by CCDS ID:12495.1Re-query CCDS DB by GeneID:163081See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360729.8 ENSP00000353957.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360729.8Link to Ensembl Protein Viewer:ENSP00000353957.3Re-query CCDS DB by Nucleotide ID:ENST00000360729Re-query CCDS DB by Protein ID:ENSP00000353957
Original member Current member EBI ENST00000585696.5 ENSP00000467379.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585696.5Link to Ensembl Protein Viewer:ENSP00000467379.1Re-query CCDS DB by Nucleotide ID:ENST00000585696Re-query CCDS DB by Protein ID:ENSP00000467379
Original member Current member NCBI NM_001322911.2 NP_001309840.1 Accepted alive Link to Nucleotide Sequence:NM_001322911.2Link to Protein Sequence:NP_001309840.1Re-query CCDS DB by Nucleotide ID:NM_001322911Re-query CCDS DB by Protein ID:NP_001309840Link to BLAST:NP_001309840.1
Original member Current member NCBI NM_001322912.1 NP_001309841.1 Accepted alive Link to Nucleotide Sequence:NM_001322912.1Link to Protein Sequence:NP_001309841.1Re-query CCDS DB by Nucleotide ID:NM_001322912Re-query CCDS DB by Protein ID:NP_001309841Link to BLAST:NP_001309841.1
Original member Current member NCBI NM_001387773.1 NP_001374702.1 Accepted alive Link to Nucleotide Sequence:NM_001387773.1Link to Protein Sequence:NP_001374702.1Re-query CCDS DB by Nucleotide ID:NM_001387773Re-query CCDS DB by Protein ID:NP_001374702Link to BLAST:NP_001374702.1
Original member Current member NCBI NM_152603.5 NP_689816.2 Accepted alive Link to Nucleotide Sequence:NM_152603.5Link to Protein Sequence:NP_689816.2Re-query CCDS DB by Nucleotide ID:NM_152603Re-query CCDS DB by Protein ID:NP_689816Link to BLAST:NP_689816.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001309840.1 616 Q8N184-1 616 100% 0 0
NP_001309841.1 616 Q8N184-1 616 100% 0 0
NP_001374702.1 616 Q8N184-1 616 100% 0 0
NP_689816.2 616 Q8N184-1 616 100% 0 0

Chromosomal Locations for CCDS 12495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36712470 36712512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36712781 36712867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36718948 36720668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1851 nt):
ATGGATGTGATGTTGGAAAACTATTGCCACCTCATCTCTGTGGGGTGTCACATGACCAAACCTGATGTGA
TCCTCAAGTTGGAACGAGGAGAAGAGCCATGGACATCATTTGCAGGTCATACCTGCTTGGAAGAAAACTG
GAAAGCTGAAGACTTTTTAGTGAAATTCAAGGAACACCAAGAGAAGTATTCTAGATCAGTTGTAAGCATC
AACCACAAAAAACTGGTGAAGGAGAAGAGTAAAATATATGAAAAGACATTTACTCTAGGCAAAAACCCTG
TGAATTCAAAAAATCTACCTCCTGAATATGATACTCATGGAAGGATTTTGAAAAATGTTTCAGAATTAAT
CATCAGTAATCTAAATCCTGCAAGAAAGAGACTTAGTGAGTATAATGGATATGGGAAATCACTCCTGAGT
ACTAAACAAGAGACTACTCATCCTGAAGTCAAATCCCATAATCAAAGTGCCAGAGCTTTCAGTCATAATG
AAGTTCTTATGCAGTATCAGAAAACGGAAACTCCAGCACAGTCATTTGGATATAATGACTGTGAGAAATC
ATTCCTTCAAAGGGGAGGCCTGATTACACATAGTAGACCTTACAAAGGAGAAAACCCATCTGTATATAAT
AAAAAAAGAAGAGCAACCAATATTGAAAAAAAACATACATGCAATGAATGTGGGAAATCTTTCTGCAGGA
AATCAGTATTGATTCTGCATCAGGGAATTCACTCAGAAGAAAAACCCTATCAATGTCATCAATGTGGAAA
TGCATTTAGAAGGAAATCATATCTCATTGATCATCAGAGAACTCACACAGGAGAGAAACCCTTTGTTTGC
AATGAATGTGGTAAGTCCTTCCGCCTCAAGACAGCCCTCACTGATCATCAGAGAACACACACAGGGGAGA
AATCGTATGAATGTCTGCAATGTAGGAATGCCTTCAGATTGAAGTCACACCTCATTCGTCATCAGAGAAC
TCACACGGGAGAGAAACCATATGAGTGTAATGACTGTGGGAAGTCCTTCCGCCAGAAGACAACACTCTCT
CTACATCAGAGAATCCATACAGGTGAGAAACCCTACATTTGTAAAGAATGTGGGAAGTCCTTTCACCAGA
AGGCAAATCTTACTGTACATCAGAGAACTCATACAGGGGAAAAGCCCTATATTTGTAATGAATGTGGGAA
ATCCTTCTCCCAGAAGACAACCCTTGCTCTTCATGAGAAAACTCATAATGAGGAGAAACCCTATATTTGT
AGTGAATGTGGAAAGTCCTTCCGCCAGAAGACAACCCTTGTAGCACATCAGAGAACACATACAGGGGAGA
AATCTTATGAATGTCCTCACTGTGGGAAGGCCTTTAGAATGAAGTCATACCTCATTGATCATCACCGAAC
TCACACAGGAGAGAAACCATATGAATGTAATGAATGTGGTAAATCATTCAGTCAAAAGACAAATCTCAAT
CTACATCAGAGAATTCATACAGGGGAGAAACCCTATGTTTGTAATGAATGTGGGAAGTCCTTTCGCCAGA
AAGCAACCCTCACTGTACATCAGAAAATACATACCGGCCAGAAATCCTATGAATGTCCTCAGTGTGGGAA
AGCCTTTAGCAGGAAGTCATATCTCATTCATCATCAAAGAACTCATACGGGAGAGAAACCATATAAATGT
AGTGAATGTGGAAAGTGCTTCCGCCAGAAGACAAATCTTATTGTACATCAGAGAACTCACACAGGTGAGA
AACCCTATGTTTGTAATGAGTGTGGTAAGTCTTTCAGTTATAAGAGAAACCTCATTGTCCATCAAAGAAC
TCACAAGGGAGAAAACATTGAAATGCAATAA

Translation (616 aa):
MDVMLENYCHLISVGCHMTKPDVILKLERGEEPWTSFAGHTCLEENWKAEDFLVKFKEHQEKYSRSVVSI
NHKKLVKEKSKIYEKTFTLGKNPVNSKNLPPEYDTHGRILKNVSELIISNLNPARKRLSEYNGYGKSLLS
TKQETTHPEVKSHNQSARAFSHNEVLMQYQKTETPAQSFGYNDCEKSFLQRGGLITHSRPYKGENPSVYN
KKRRATNIEKKHTCNECGKSFCRKSVLILHQGIHSEEKPYQCHQCGNAFRRKSYLIDHQRTHTGEKPFVC
NECGKSFRLKTALTDHQRTHTGEKSYECLQCRNAFRLKSHLIRHQRTHTGEKPYECNDCGKSFRQKTTLS
LHQRIHTGEKPYICKECGKSFHQKANLTVHQRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEEKPYIC
SECGKSFRQKTTLVAHQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEKPYECNECGKSFSQKTNLN
LHQRIHTGEKPYVCNECGKSFRQKATLTVHQKIHTGQKSYECPQCGKAFSRKSYLIHHQRTHTGEKPYKC
SECGKCFRQKTNLIVHQRTHTGEKPYVCNECGKSFSYKRNLIVHQRTHKGENIEMQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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