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Report for CCDS12625.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12625.1 Public Homo sapiens 19 ZNF576 24 110 108 CCDS HistoryNCBI Gene:79177Re-query CCDS DB by CCDS ID:12625.1Re-query CCDS DB by GeneID:79177See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12625.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336564.5 ENSP00000337852.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336564.5Link to Ensembl Protein Viewer:ENSP00000337852.4Re-query CCDS DB by Nucleotide ID:ENST00000336564Re-query CCDS DB by Protein ID:ENSP00000337852
Original member Current member EBI ENST00000391965.6 ENSP00000375827.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391965.6Link to Ensembl Protein Viewer:ENSP00000375827.2Re-query CCDS DB by Nucleotide ID:ENST00000391965Re-query CCDS DB by Protein ID:ENSP00000375827
Original member Current member EBI ENST00000529930.1 ENSP00000435463.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529930.1Link to Ensembl Protein Viewer:ENSP00000435463.1Re-query CCDS DB by Nucleotide ID:ENST00000529930Re-query CCDS DB by Protein ID:ENSP00000435463
Original member Current member EBI ENST00000533118.5 ENSP00000435899.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533118.5Link to Ensembl Protein Viewer:ENSP00000435899.1Re-query CCDS DB by Nucleotide ID:ENST00000533118Re-query CCDS DB by Protein ID:ENSP00000435899
Original member Current member EBI ENST00000528387.5 ENSP00000435934.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528387.5Link to Ensembl Protein Viewer:ENSP00000435934.1Re-query CCDS DB by Nucleotide ID:ENST00000528387Re-query CCDS DB by Protein ID:ENSP00000435934
Original member Current member EBI ENST00000525771.1 ENSP00000436182.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525771.1Link to Ensembl Protein Viewer:ENSP00000436182.1Re-query CCDS DB by Nucleotide ID:ENST00000525771Re-query CCDS DB by Protein ID:ENSP00000436182
Original member Current member NCBI NM_001145347.2 NP_001138819.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145347.2Link to Protein Sequence:NP_001138819.1Re-query CCDS DB by Nucleotide ID:NM_001145347Re-query CCDS DB by Protein ID:NP_001138819Link to BLAST:NP_001138819.1
Original member Current member NCBI NM_024327.2 NP_077303.1 Accepted alive Link to Nucleotide Sequence:NM_024327.2Link to Protein Sequence:NP_077303.1Re-query CCDS DB by Nucleotide ID:NM_024327Re-query CCDS DB by Protein ID:NP_077303Link to BLAST:NP_077303.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138819.1 170 Q9H609 170 100% 0 0
NP_077303.1 170 Q9H609 170 100% 0 0

Chromosomal Locations for CCDS 12625.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43597109 43597193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43598831 43599258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGGAGGACCCGAACCCTGAAGAGAACATGAAGCAGCAGGATTCACCCAAGGAGAGAAGTCCCCAGAGCC
CAGGAGGCAACATCTGCCACCTGGGGGCCCCGAAGTGCACCCGCTGCCTCATCACCTTCGCAGATTCCAA
GTTCCAGGAGCGTCACATGAAGCGGGAGCACCCAGCGGACTTCGTGGCCCAGAAGCTGCAGGGGGTCCTC
TTCATCTGCTTCACCTGCGCCCGCTCCTTCCCCTCCTCCAAAGCCCTAATCACCCACCAGCGCAGCCACG
GTCCAGCCGCCAAGCCCACCCTGCCGGTTGCAACCACTACTGCCCAGCCCACCTTCCCTTGTCCTGACTG
TGGCAAGACCTTTGGGCAGGCTGTTTCTCTGAGGCGGCACCGCCAGATGCATGAGGTCCGTGCCCCTCCT
GGCACCTTCGCCTGCACAGAGTGCGGTCAGGACTTTGCTCAGGAAGCAGGGCTGCATCAACACTACATTC
GGCATGCCCGGGGGGAGCTCTGA

Translation (170 aa):
MEDPNPEENMKQQDSPKERSPQSPGGNICHLGAPKCTRCLITFADSKFQERHMKREHPADFVAQKLQGVL
FICFTCARSFPSSKALITHQRSHGPAAKPTLPVATTTAQPTFPCPDCGKTFGQAVSLRRHRQMHEVRAPP
GTFACTECGQDFAQEAGLHQHYIRHARGEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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