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Report for CCDS1295.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1295.1 Public Homo sapiens 1 FMO4 24 110 108 CCDS HistoryNCBI Gene:2329Re-query CCDS DB by CCDS ID:1295.1Re-query CCDS DB by GeneID:2329See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1295.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367749.4 ENSP00000356723.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367749.4Link to Ensembl Protein Viewer:ENSP00000356723.3Re-query CCDS DB by Nucleotide ID:ENST00000367749Re-query CCDS DB by Protein ID:ENSP00000356723
Original member Current member NCBI NM_002022.3 NP_002013.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002022.3Link to Protein Sequence:NP_002013.1Re-query CCDS DB by Nucleotide ID:NM_002022Re-query CCDS DB by Protein ID:NP_002013Link to BLAST:NP_002013.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002013.1 558 P31512 558 100% 0 0

Chromosomal Locations for CCDS 1295.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 171319826 171319957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171323004 171323192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171324138 171324300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171331640 171331782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171332709 171332908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171334411 171334763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171337356 171337425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171341413 171341839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGGCCAAGAAAGTTGCAGTGATTGGAGCTGGTGTGAGTGGCCTCTCCTCCATCAAATGCTGTGTGGATG
AGGACCTGGAGCCCACCTGCTTTGAGAGAAGTGATGACATTGGGGGATTATGGAAGTTTACTGAATCTTC
CAAAGATGGGATGACCAGGGTCTATAAGTCATTAGTGACAAATGTCTGTAAGGAAATGTCATGTTACAGT
GACTTCCCTTTCCACGAAGATTATCCTAATTTCATGAACCATGAAAAATTTTGGGACTATCTCCAAGAAT
TTGCTGAGCACTTTGACCTCCTGAAATACATTCAGTTTAAGACCACTGTGTGCAGCATAACGAAGCGTCC
AGACTTCTCCGAAACTGGTCAGTGGGATGTTGTCACAGAGACAGAGGGCAAGCAAAATAGAGCTGTCTTT
GATGCTGTTATGGTTTGCACTGGACATTTCCTGAATCCCCATTTACCTTTGGAAGCCTTTCCTGGAATTC
ATAAGTTTAAAGGTCAGATCCTGCATAGTCAAGAGTACAAGATCCCAGAAGGCTTTCAGGGCAAACGCGT
CTTGGTGATTGGTCTTGGGAACACTGGAGGAGACATTGCTGTGGAACTCAGTCGAACGGCAGCTCAGGTA
CTTCTCAGTACTAGAACTGGTACCTGGGTTCTTGGGCGCTCTTCAGATTGGGGCTATCCTTATAATATGA
TGGTTACAAGAAGATGCTGTAGTTTTATTGCACAAGTTCTGCCTTCACGTTTTCTAAACTGGATTCAAGA
AAGGAAGTTGAATAAGAGATTTAATCATGAGGATTATGGATTAAGTATTACCAAAGGGAAAAAAGCAAAA
TTCATTGTGAATGATGAGCTGCCAAACTGTATCCTCTGTGGGGCAATCACTATGAAAACCAGCGTGATTG
AATTTACAGAAACCTCTGCTGTCTTTGAAGATGGGACAGTGGAAGAAAACATTGATGTTGTGATCTTCAC
TACAGGATATACATTTTCTTTTCCATTTTTTGAAGAACCTCTTAAAAGCCTCTGTACAAAGAAGATATTT
CTATACAAGCAAGTCTTTCCCTTAAACCTAGAGAGAGCGACATTAGCCATCATCGGCCTTATCGGCCTTA
AAGGATCCATCTTATCAGGCACAGAGCTCCAAGCACGATGGGTCACAAGAGTATTCAAAGGACTCTGTAA
GATACCTCCATCCCAAAAATTGATGATGGAGGCTACTGAAAAGGAACAGCTCATTAAAAGGGGAGTGTTT
AAAGACACCAGCAAAGACAAATTTGACTACATTGCCTACATGGATGATATCGCTGCCTGCATAGGCACAA
AGCCCAGCATCCCACTTCTGTTCCTCAAGGATCCCAGACTAGCTTGGGAAGTTTTCTTTGGACCATGTAC
TCCTTATCAGTACCGCCTCATGGGCCCTGGAAAATGGGATGGAGCCAGAAATGCCATCCTGACCCAGTGG
GACAGAACATTGAAACCTTTAAAAACTCGAATTGTCCCTGATTCCTCCAAGCCTGCCTCCATGTCACATT
ATTTAAAAGCCTGGGGGGCACCTGTCCTACTTGCCTCTCTTCTACTTATCTGTAAATCTTCACTTTTCTT
GAAATTGGTGAGAGATAAACTACAGGACAGAATGTCCCCTTACCTAGTAAGTCTTTGGCGAGGATGA

Translation (558 aa):
MAKKVAVIGAGVSGLSSIKCCVDEDLEPTCFERSDDIGGLWKFTESSKDGMTRVYKSLVTNVCKEMSCYS
DFPFHEDYPNFMNHEKFWDYLQEFAEHFDLLKYIQFKTTVCSITKRPDFSETGQWDVVTETEGKQNRAVF
DAVMVCTGHFLNPHLPLEAFPGIHKFKGQILHSQEYKIPEGFQGKRVLVIGLGNTGGDIAVELSRTAAQV
LLSTRTGTWVLGRSSDWGYPYNMMVTRRCCSFIAQVLPSRFLNWIQERKLNKRFNHEDYGLSITKGKKAK
FIVNDELPNCILCGAITMKTSVIEFTETSAVFEDGTVEENIDVVIFTTGYTFSFPFFEEPLKSLCTKKIF
LYKQVFPLNLERATLAIIGLIGLKGSILSGTELQARWVTRVFKGLCKIPPSQKLMMEATEKEQLIKRGVF
KDTSKDKFDYIAYMDDIAACIGTKPSIPLLFLKDPRLAWEVFFGPCTPYQYRLMGPGKWDGARNAILTQW
DRTLKPLKTRIVPDSSKPASMSHYLKAWGAPVLLASLLLICKSSLFLKLVRDKLQDRMSPYLVSLWRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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