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Report for CCDS13189.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13189.1 Public Homo sapiens 20 BCL2L1 24 110 108 CCDS HistoryNCBI Gene:598Re-query CCDS DB by CCDS ID:13189.1Re-query CCDS DB by GeneID:598See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13189.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307677.5 ENSP00000302564.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307677.5Link to Ensembl Protein Viewer:ENSP00000302564.4Re-query CCDS DB by Nucleotide ID:ENST00000307677Re-query CCDS DB by Protein ID:ENSP00000302564
Original member Current member EBI ENST00000376062.6 ENSP00000365230.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376062.6Link to Ensembl Protein Viewer:ENSP00000365230.2Re-query CCDS DB by Nucleotide ID:ENST00000376062Re-query CCDS DB by Protein ID:ENSP00000365230
Original member Current member EBI ENST00000439267.2 ENSP00000389688.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439267.2Link to Ensembl Protein Viewer:ENSP00000389688.2Re-query CCDS DB by Nucleotide ID:ENST00000439267Re-query CCDS DB by Protein ID:ENSP00000389688
Original member Current member EBI ENST00000420488.6 ENSP00000390760.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420488.6Link to Ensembl Protein Viewer:ENSP00000390760.2Re-query CCDS DB by Nucleotide ID:ENST00000420488Re-query CCDS DB by Protein ID:ENSP00000390760
Original member Current member EBI ENST00000456404.6 ENSP00000395545.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456404.6Link to Ensembl Protein Viewer:ENSP00000395545.2Re-query CCDS DB by Nucleotide ID:ENST00000456404Re-query CCDS DB by Protein ID:ENSP00000395545
Original member Current member EBI ENST00000434194.2 ENSP00000401173.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434194.2Link to Ensembl Protein Viewer:ENSP00000401173.2Re-query CCDS DB by Nucleotide ID:ENST00000434194Re-query CCDS DB by Protein ID:ENSP00000401173
Original member Current member EBI ENST00000676582.1 ENSP00000503725.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676582.1Link to Ensembl Protein Viewer:ENSP00000503725.1Re-query CCDS DB by Nucleotide ID:ENST00000676582Re-query CCDS DB by Protein ID:ENSP00000503725
Original member Current member EBI ENST00000678563.1 ENSP00000504237.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678563.1Link to Ensembl Protein Viewer:ENSP00000504237.1Re-query CCDS DB by Nucleotide ID:ENST00000678563Re-query CCDS DB by Protein ID:ENSP00000504237
Original member Current member EBI ENST00000677194.1 ENSP00000504387.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677194.1Link to Ensembl Protein Viewer:ENSP00000504387.1Re-query CCDS DB by Nucleotide ID:ENST00000677194Re-query CCDS DB by Protein ID:ENSP00000504387
Original member Current member EBI ENST00000676942.1 ENSP00000504536.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676942.1Link to Ensembl Protein Viewer:ENSP00000504536.1Re-query CCDS DB by Nucleotide ID:ENST00000676942Re-query CCDS DB by Protein ID:ENSP00000504536
Original member Current member NCBI NM_001317919.2 NP_001304848.1 Accepted alive Link to Nucleotide Sequence:NM_001317919.2Link to Protein Sequence:NP_001304848.1Re-query CCDS DB by Nucleotide ID:NM_001317919Re-query CCDS DB by Protein ID:NP_001304848Link to BLAST:NP_001304848.1
Original member Current member NCBI NM_001317920.2 NP_001304849.1 Accepted alive Link to Nucleotide Sequence:NM_001317920.2Link to Protein Sequence:NP_001304849.1Re-query CCDS DB by Nucleotide ID:NM_001317920Re-query CCDS DB by Protein ID:NP_001304849Link to BLAST:NP_001304849.1
Original member Current member NCBI NM_001317921.2 NP_001304850.1 Accepted alive Link to Nucleotide Sequence:NM_001317921.2Link to Protein Sequence:NP_001304850.1Re-query CCDS DB by Nucleotide ID:NM_001317921Re-query CCDS DB by Protein ID:NP_001304850Link to BLAST:NP_001304850.1
Original member Current member NCBI NM_001322239.2 NP_001309168.1 Accepted alive Link to Nucleotide Sequence:NM_001322239.2Link to Protein Sequence:NP_001309168.1Re-query CCDS DB by Nucleotide ID:NM_001322239Re-query CCDS DB by Protein ID:NP_001309168Link to BLAST:NP_001309168.1
Original member Current member NCBI NM_001322240.2 NP_001309169.1 Accepted alive Link to Nucleotide Sequence:NM_001322240.2Link to Protein Sequence:NP_001309169.1Re-query CCDS DB by Nucleotide ID:NM_001322240Re-query CCDS DB by Protein ID:NP_001309169Link to BLAST:NP_001309169.1
Original member Current member NCBI NM_001322242.2 NP_001309171.1 Accepted alive Link to Nucleotide Sequence:NM_001322242.2Link to Protein Sequence:NP_001309171.1Re-query CCDS DB by Nucleotide ID:NM_001322242Re-query CCDS DB by Protein ID:NP_001309171Link to BLAST:NP_001309171.1
Original member Current member NCBI NM_138578.3 NP_612815.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138578.3Link to Protein Sequence:NP_612815.1Re-query CCDS DB by Nucleotide ID:NM_138578Re-query CCDS DB by Protein ID:NP_612815Link to BLAST:NP_612815.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304848.1 233 Q07817-1 233 100% 0 0
NP_001304849.1 233 Q07817-1 233 100% 0 0
NP_001304850.1 233 Q07817-1 233 100% 0 0
NP_001309168.1 233 Q07817-1 233 100% 0 0
NP_001309169.1 233 Q07817-1 233 100% 0 0
NP_001309171.1 233 Q07817-1 233 100% 0 0
NP_612815.1 233 Q07817-1 233 100% 0 0

Chromosomal Locations for CCDS 13189.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 31665949 31666086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 31721655 31722218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGTCTCAGAGCAACCGGGAGCTGGTGGTTGACTTTCTCTCCTACAAGCTTTCCCAGAAAGGATACAGCT
GGAGTCAGTTTAGTGATGTGGAAGAGAACAGGACTGAGGCCCCAGAAGGGACTGAATCGGAGATGGAGAC
CCCCAGTGCCATCAATGGCAACCCATCCTGGCACCTGGCAGACAGCCCCGCGGTGAATGGAGCCACTGGC
CACAGCAGCAGTTTGGATGCCCGGGAGGTGATCCCCATGGCAGCAGTAAAGCAAGCGCTGAGGGAGGCAG
GCGACGAGTTTGAACTGCGGTACCGGCGGGCATTCAGTGACCTGACATCCCAGCTCCACATCACCCCAGG
GACAGCATATCAGAGCTTTGAACAGGTAGTGAATGAACTCTTCCGGGATGGGGTAAACTGGGGTCGCATT
GTGGCCTTTTTCTCCTTCGGCGGGGCACTGTGCGTGGAAAGCGTAGACAAGGAGATGCAGGTATTGGTGA
GTCGGATCGCAGCTTGGATGGCCACTTACCTGAATGACCACCTAGAGCCTTGGATCCAGGAGAACGGCGG
CTGGGATACTTTTGTGGAACTCTATGGGAACAATGCAGCAGCCGAGAGCCGAAAGGGCCAGGAACGCTTC
AACCGCTGGTTCCTGACGGGCATGACTGTGGCCGGCGTGGTTCTGCTGGGCTCACTCTTCAGTCGGAAAT
GA

Translation (233 aa):
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAVNGATG
HSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRI
VAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQERF
NRWFLTGMTVAGVVLLGSLFSRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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