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Report for CCDS13613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13613.1 Public Homo sapiens 21 MRAP 24 110 108 CCDS HistoryNCBI Gene:56246Re-query CCDS DB by CCDS ID:13613.1Re-query CCDS DB by GeneID:56246See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303645.10 ENSP00000306697.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303645.10Link to Ensembl Protein Viewer:ENSP00000306697.5Re-query CCDS DB by Nucleotide ID:ENST00000303645Re-query CCDS DB by Protein ID:ENSP00000306697
Original member Current member EBI ENST00000399784.6 ENSP00000382684.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399784.6Link to Ensembl Protein Viewer:ENSP00000382684.2Re-query CCDS DB by Nucleotide ID:ENST00000399784Re-query CCDS DB by Protein ID:ENSP00000382684
Original member Current member NCBI NM_001379228.1 NP_001366157.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001379228.1Link to Protein Sequence:NP_001366157.1Re-query CCDS DB by Nucleotide ID:NM_001379228Re-query CCDS DB by Protein ID:NP_001366157Link to BLAST:NP_001366157.1
Original member Current member NCBI NM_178817.4 NP_848932.1 Accepted alive Link to Nucleotide Sequence:NM_178817.4Link to Protein Sequence:NP_848932.1Re-query CCDS DB by Nucleotide ID:NM_178817Re-query CCDS DB by Protein ID:NP_848932Link to BLAST:NP_848932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001366157.1 172 Q8TCY5-4 172 100% 0 0
NP_848932.1 172 Q8TCY5-4 172 100% 0 0

Chromosomal Locations for CCDS 13613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 32298972 32299077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32306640 32306739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32311684 32311996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGGCCAACGGGACCAACGCCTCTGCCCCATACTACAGCTATGAATACTACCTGGACTATCTGGACCTCA
TTCCCGTGGACGAGAAGAAGCTGAAAGCCCACAAACATTCCATCGTGATCGCATTCTGGGTGAGCCTGGC
TGCCTTCGTGGTGCTGCTCTTCCTCATCTTGCTCTACATGTCCTGGTCCGCCTCCCCGCAGATGAGGAAC
AGCCCCAAGCACCACCAAACATGCCCCTGGAGTCACGGCCTCAACCTCCACCTCTGCATCCAGAAGTGCC
TGCCGTGCCACAGGGAACCCCTGGCAACCTCACAGGCTCAGGCGAGCTCAGTGGAGCCAGGGAGCAGAAC
TGGCCCTGACCAGCCGCTACGACAGGAGAGCTCCTCCACCTTGCCCCTCGGGGGTTTCCAGACCCACCCC
ACTCTCCTCTGGGAACTGACCCTCAATGGGGGTCCCCTCGTCAGGAGCAAGCCCAGCGAGCCTCCCCCTG
GAGACAGGACCTCTCAATTGCAGAGCTGA

Translation (172 aa):
MANGTNASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYMSWSASPQMRN
SPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQAQASSVEPGSRTGPDQPLRQESSSTLPLGGFQTHP
TLLWELTLNGGPLVRSKPSEPPPGDRTSQLQS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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