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Report for CCDS13650.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13650.1 Public Homo sapiens 21 PIGP 24 110 108 CCDS HistoryNCBI Gene:51227Re-query CCDS DB by CCDS ID:13650.1Re-query CCDS DB by GeneID:51227See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13650.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360525.9 ENSP00000353719.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360525.9Link to Ensembl Protein Viewer:ENSP00000353719.3Re-query CCDS DB by Nucleotide ID:ENST00000360525Re-query CCDS DB by Protein ID:ENSP00000353719
Original member Current member EBI ENST00000399102.5 ENSP00000382053.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399102.5Link to Ensembl Protein Viewer:ENSP00000382053.1Re-query CCDS DB by Nucleotide ID:ENST00000399102Re-query CCDS DB by Protein ID:ENSP00000382053
Original member Current member EBI ENST00000399103.5 ENSP00000382054.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399103.5Link to Ensembl Protein Viewer:ENSP00000382054.1Re-query CCDS DB by Nucleotide ID:ENST00000399103Re-query CCDS DB by Protein ID:ENSP00000382054
Original member Current member NCBI NM_001320480.2 NP_001307409.1 Accepted alive Link to Nucleotide Sequence:NM_001320480.2Link to Protein Sequence:NP_001307409.1Re-query CCDS DB by Nucleotide ID:NM_001320480Re-query CCDS DB by Protein ID:NP_001307409Link to BLAST:NP_001307409.1
Original member Current member NCBI NM_153682.3 NP_710149.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153682.3Link to Protein Sequence:NP_710149.1Re-query CCDS DB by Nucleotide ID:NM_153682Re-query CCDS DB by Protein ID:NP_710149Link to BLAST:NP_710149.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307409.1 134 P57054-2 134 100% 0 0
NP_710149.1 134 P57054-2 134 100% 0 0

Chromosomal Locations for CCDS 13650.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 37065582 37065712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37067262 37067380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37069552 37069624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37072434 37072515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGGTGGAAAATTCACCGTCGCCATTGCCAGAAAGAGCGATTTATGGCTTTGTTCTTTTCTTAAGCTCCC
AATTTGGCTTCATACTTTACCTCGTGTGGGCCTTTATTCCTGAATCTTGGCTAAACTCTTTAGGTTTAAC
CTATTGGCCTCAAAAATATTGGGCAGTTGCATTACCTGTCTACCTCCTTATTGCTATAGTAATTGGCTAC
GTGCTCTTGTTTGGGATTAACATGATGAGTACCTCTCCACTCGACTCCATCCATACAATCACAGATAACT
ATGCAAAAAATCAACAGCAGAAGAAATACCAAGAGGAGGCCATTCCAGCCTTAAGAGATATTTCTATTAG
TGAAGTAAACCAAATGTTCTTTCTTGCAGCCAAAGAACTTTACACCAAAAACTGA

Translation (134 aa):
MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAIVIGY
VLLFGINMMSTSPLDSIHTITDNYAKNQQQKKYQEEAIPALRDISISEVNQMFFLAAKELYTKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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