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Report for CCDS13916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13916.1 Public Homo sapiens 22 RASD2 24 110 108 CCDS HistoryNCBI Gene:23551Re-query CCDS DB by CCDS ID:13916.1Re-query CCDS DB by GeneID:23551See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216127.5 ENSP00000216127.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216127.5Link to Ensembl Protein Viewer:ENSP00000216127.4Re-query CCDS DB by Nucleotide ID:ENST00000216127Re-query CCDS DB by Protein ID:ENSP00000216127
Original member Current member NCBI NM_001366725.1 NP_001353654.1 Accepted alive Link to Nucleotide Sequence:NM_001366725.1Link to Protein Sequence:NP_001353654.1Re-query CCDS DB by Nucleotide ID:NM_001366725Re-query CCDS DB by Protein ID:NP_001353654Link to BLAST:NP_001353654.1
Original member Current member NCBI NM_001376515.1 NP_001363444.1 Accepted alive Link to Nucleotide Sequence:NM_001376515.1Link to Protein Sequence:NP_001363444.1Re-query CCDS DB by Nucleotide ID:NM_001376515Re-query CCDS DB by Protein ID:NP_001363444Link to BLAST:NP_001363444.1
Original member Current member NCBI NM_001376516.1 NP_001363445.1 Accepted alive Link to Nucleotide Sequence:NM_001376516.1Link to Protein Sequence:NP_001363445.1Re-query CCDS DB by Nucleotide ID:NM_001376516Re-query CCDS DB by Protein ID:NP_001363445Link to BLAST:NP_001363445.1
Original member Current member NCBI NM_014310.4 NP_055125.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014310.4Link to Protein Sequence:NP_055125.2Re-query CCDS DB by Nucleotide ID:NM_014310Re-query CCDS DB by Protein ID:NP_055125Link to BLAST:NP_055125.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353654.1 266 Q96D21 266 100% 0 0
NP_001363444.1 266 Q96D21 266 100% 0 0
NP_001363445.1 266 Q96D21 266 100% 0 0
NP_055125.2 266 Q96D21 266 100% 0 0

Chromosomal Locations for CCDS 13916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 35546810 35547080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 35551503 35552032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGATGAAGACTTTGTCCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGG
TGCTGGGTGCCTCTCGGGTGGGCAAGAGCTCCATCGTGTCTCGCTTCCTCAATGGCCGCTTTGAGGACCA
GTACACACCCACCATCGAGGACTTCCACCGTAAGGTATACAACATCCGCGGCGACATGTACCAGCTCGAC
ATCCTGGATACCTCTGGCAACCACCCCTTCCCCGCCATGCGCAGGCTGTCCATCCTCACAGGGGATGTCT
TCATCCTGGTGTTCAGCCTGGATAACCGGGAGTCCTTCGATGAGGTCAAGCGCCTTCAGAAGCAGATCCT
GGAGGTCAAGTCCTGCCTGAAGAACAAGACCAAGGAGGCGGCGGAGCTGCCCATGGTCATCTGTGGCAAC
AAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGGCGACG
AGAACTGCGCCTACTTCGAGGTGTCGGCCAAGAAGAACACCAACGTGGACGAGATGTTCTACGTGCTCTT
CAGCATGGCCAAGCTGCCACACGAGATGAGCCCCGCCCTGCATCGCAAGATCTCCGTGCAGTACGGTGAC
GCCTTCCACCCCAGGCCCTTCTGCATGCGCCGCGTCAAGGAGATGGACGCCTATGGCATGGTCTCGCCCT
TCGCCCGCCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGC
CCGTGAGAGGGACAAGTGCACCATCCAGTGA

Translation (266 aa):
MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIRGDMYQLD
ILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQILEVKSCLKNKTKEAAELPMVICGN
KNDHGELCRQVPTTEAELLVSGDENCAYFEVSAKKNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGD
AFHPRPFCMRRVKEMDAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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