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Report for CCDS13937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13937.1 Public Homo sapiens 22 CIMIP4 24 110 108 CCDS HistoryNCBI Gene:339669Re-query CCDS DB by CCDS ID:13937.1Re-query CCDS DB by GeneID:339669See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13937.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402860.7 ENSP00000385179.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402860.7Link to Ensembl Protein Viewer:ENSP00000385179.3Re-query CCDS DB by Nucleotide ID:ENST00000402860Re-query CCDS DB by Protein ID:ENSP00000385179
Original member Current member NCBI NM_178552.4 NP_848647.1 Accepted alive Link to Nucleotide Sequence:NM_178552.4Link to Protein Sequence:NP_848647.1Re-query CCDS DB by Nucleotide ID:NM_178552Re-query CCDS DB by Protein ID:NP_848647Link to BLAST:NP_848647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848647.1 195 O43247-2 195 100% 0 0

Chromosomal Locations for CCDS 13937.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 36991179 36991276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 36991481 36991591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 36999840 36999984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37001837 37002070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGGACCCACAGTCCAGGTCCCTGAAGAATGCGGGCTCTCGATCCTCCTCGAGAGAGAACAGGGCCACCT
CGGGAGAGGGGGCTCAGCCATGCCAGGGGACGGATGACGGTCCCAGCTTGGGGGCTCAGGACCAGAGGAG
CACGCCCACGAACCAGAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTG
GACCAGCTGGTCTCCGAGGAGCAGGCTCAAAAGGCTATTGATGAAGTCTTCGAGGGCCAGAAAAGGGCAA
GCTCATGGCCCAGCAGGACCCAGAATCCTGTGGAAATCTCCTCCGTCTTCTCAGACTACTATGACCTCGG
CTACAACATGCGGTCAAACTTGTTTCGAGGGGCTGCTGAGGAGACAAAGAGCCTCATGAAGGCTTCTTAC
ACACCAGAGGTCATTGAGAAATCAGTGAGGGACTTAGAACACTGGCATGGCAGGAAGACGGATGATCTGG
GGCGGTGGCACCAGAAAAATGCTATGAACCTGAACTTGCAGAAAGCACTGGAAGAGAAATATGGAGAAAA
CAGCAAATCCAAGAGCTCCAAGTACTAG

Translation (195 aa):
MDPQSRSLKNAGSRSSSRENRATSGEGAQPCQGTDDGPSLGAQDQRSTPTNQKGSIIPNNIRHKFGSNVV
DQLVSEEQAQKAIDEVFEGQKRASSWPSRTQNPVEISSVFSDYYDLGYNMRSNLFRGAAEETKSLMKASY
TPEVIEKSVRDLEHWHGRKTDDLGRWHQKNAMNLNLQKALEEKYGENSKSKSSKY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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