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Report for CCDS13995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13995.1 Public Homo sapiens 22 MIEF1 24 110 108 CCDS HistoryNCBI Gene:54471Re-query CCDS DB by CCDS ID:13995.1Re-query CCDS DB by GeneID:54471See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13995.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325301.7 ENSP00000327124.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325301.7Link to Ensembl Protein Viewer:ENSP00000327124.2Re-query CCDS DB by Nucleotide ID:ENST00000325301Re-query CCDS DB by Protein ID:ENSP00000327124
Original member Current member EBI ENST00000404569.5 ENSP00000385191.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404569.5Link to Ensembl Protein Viewer:ENSP00000385191.1Re-query CCDS DB by Nucleotide ID:ENST00000404569Re-query CCDS DB by Protein ID:ENSP00000385191
Original member Current member NCBI NM_019008.6 NP_061881.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019008.6Link to Protein Sequence:NP_061881.2Re-query CCDS DB by Nucleotide ID:NM_019008Re-query CCDS DB by Protein ID:NP_061881Link to BLAST:NP_061881.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061881.2 463 Q9NQG6-1 463 100% 0 0

Chromosomal Locations for CCDS 13995.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 39511295 39511438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39511849 39512026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39512232 39512494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39513517 39514323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGC
TCTCCAATGCCCGGCTGGTGCTGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAGTTAA
GCGGATGTACGATCGGGCGATCAGTGCCCCTACCAGCCCCACCCGCCTGAGCCATTCGGGGAAAAGGAGC
TGGGAAGAACCCAACTGGATGGGCTCCCCACGACTGCTGAACAGGGACATGAAGACGGGCCTGAGCCGGT
CCTTGCAGACCCTTCCCACAGACTCCTCCACCTTCGACACAGATACATTCTGCCCGCCCCGGCCCAAGCC
AGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTT
ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACA
TATGTGCCGAGCTCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCCGCTTCGGGACATGTACTTGAG
TGGCAGCCTCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTG
GAGCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGC
GTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTAGTAGGGGGCTACCT
CTCTCCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGG
TCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGC
GTGACAAACATCTCTTCATTGACTTCCTGCCATCAGTGACCCTCGGTGACACAGTCTTGGTGGCCAAACC
ACACCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGG
GCTCTGGACCAGGCTGACTCGGGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCA
CCCCGGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGAGGC
TGACTGGTCTCCGGATATGCTGGCCGACCGTTTCCTGCAGGCCTTGAGGGGACTTATCAGCTACTTAGAG
GCTGGAGTCCTGCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGCAGAGCTCACCCCTGAAGAAATAG
ACGAATTAGGATACACTCTGTATTGCTCATTGTCTGAGCCAGAGGTGCTGCTGCAGACGTAG

Translation (463 aa):
MAGAGERKGKKDDNGIGTAIDFVLSNARLVLGVGGAAMLGIATLAVKRMYDRAISAPTSPTRLSHSGKRS
WEEPNWMGSPRLLNRDMKTGLSRSLQTLPTDSSTFDTDTFCPPRPKPVARKGQVDLKKSRLRMSLQEKLL
TYYRNRAAIPAGEQARAKQAAVDICAELRSFLRAKLPDMPLRDMYLSGSLYDDLQVVTADHIQLIVPLVL
EQNLWSCIPGEDTIMNVPGFFLVRRENPEYFPRGSSYWDRCVVGGYLSPKTVADTFEKVVAGSINWPAIG
SLLDYVIRPAPPPEALTLEVQYERDKHLFIDFLPSVTLGDTVLVAKPHRLAQYDNLWRLSLRPAETARLR
ALDQADSGCRSLCLKILKAICKSTPALGHLTASQLTNVILHLAQEEADWSPDMLADRFLQALRGLISYLE
AGVLPSALNPKVNLFAELTPEEIDELGYTLYCSLSEPEVLLQT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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