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Report for CCDS14388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14388.1 Public Homo sapiens X OPHN1 24 110 108 CCDS HistoryNCBI Gene:4983Re-query CCDS DB by CCDS ID:14388.1Re-query CCDS DB by GeneID:4983See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355520.6 ENSP00000347710.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355520.6Link to Ensembl Protein Viewer:ENSP00000347710.5Re-query CCDS DB by Nucleotide ID:ENST00000355520Re-query CCDS DB by Protein ID:ENSP00000347710
Original member Current member NCBI NM_002547.3 NP_002538.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002547.3Link to Protein Sequence:NP_002538.1Re-query CCDS DB by Nucleotide ID:NM_002547Re-query CCDS DB by Protein ID:NP_002538Link to BLAST:NP_002538.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002538.1 802 O60890-1 802 100% 0 0

Chromosomal Locations for CCDS 14388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 68048424 68048457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68052540 68052590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68053645 68053810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68063854 68064177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68073152 68073299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68096870 68097029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68111854 68111959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68113181 68113239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68119248 68119332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68192919 68192993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68193890 68193952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68194465 68194498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68197186 68197264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68201619 68201710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68206573 68206673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68210153 68210282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68212108 68212212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68213862 68213972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68234487 68234588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68274738 68274809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68283056 68283117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68299001 68299096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 68432867 68433020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2409 nt):
ATGGGTCATCCCCCGCTGGAGTTCAGCGACTGCTACCTGGACAGCCCCGATTTCCGCGAGAGGCTCAAGT
GTTATGAGCAGGAACTGGAGAGGACCAACAAATTCATCAAAGACGTAATCAAAGACGGCAACGCGCTTAT
CAGCGCTATGAGAAATTATTCTTCTGCTGTTCAGAAATTTTCCCAGACGCTGCAGTCATTTCAGTTTGAT
TTCATTGGAGACACTCTGACTGATGATGAAATTAACATCGCTGAATCCTTCAAGGAATTTGCTGAATTGC
TCAACGAGGTAGAAAATGAGAGGATGATGATGGTACACAATGCTAGTGATTTGCTGATTAAACCCTTGGA
AAATTTCCGGAAGGAACAAATAGGCTTCACCAAGGAGCGGAAAAAGAAATTTGAAAAGGATGGTGAGAGG
TTTTATTCTTTACTGGATCGGCACTTACACCTGTCTTCAAAAAAGAAAGAATCTCAGTTACAAGAGGCAG
ACCTACAGGTGGACAAGGAGAGGCACAATTTTTTCGAGTCCTCTCTTGATTATGTTTATCAAATCCAGGA
AGTTCAGGAGTCCAAGAAGTTCAATATTGTGGAGCCTGTCTTGGCCTTTCTTCATAGTCTGTTCATTTCT
AACAGCCTGACTGTGGAGCTCACACAGGATTTCCTCCCATACAAACAACAGCTCCAACTCAGTTTACAGA
ATACAAGAAATCATTTCTCCAGTACCCGGGAAGAGATGGAAGAACTTAAGAAAAGGATGAAAGAAGCTCC
CCAGACATGCAAACTTCCAGGACAGCCAACTATTGAAGGCTATCTCTATACACAAGAGAAATGGGCTTTA
GGAATATCCTGGGTGAAATACTATTGCCAGTATGAGAAAGAGACCAAAACACTGACCATGACGCCTATGG
AGCAGAAGCCAGGTGCTAAGCAGGGGCCCTTGGACTTAACACTGAAGTACTGTGTGAGAAGGAAGACGGA
GTCTATCGACAAGAGGTTCTGTTTTGACATAGAAACTAATGAAAGGCCAGGAACCATCACTCTGCAGGCC
CTTTCAGAAGCTAACAGAAGGCTATGGATGGAAGCCATGGATGGGAAAGAACCTATCTACCACAGCCCTA
TAACAAAACAGCAAGAAATGGAGCTAAATGAAGTGGGCTTCAAGTTTGTCAGGAAGTGCATCAATATTAT
TGAGACCAAAGGGATCAAGACAGAAGGGTTGTACCGCACTGTGGGCAGCAATATTCAGGTTCAGAAGCTG
CTGAATGCCTTTTTTGATCCTAAATGCCCAGGAGATGTTGATTTTCATAATAGTGACTGGGACATTAAGA
CAATCACCAGCTCCTTGAAATTCTACCTCAGGAATCTTTCTGAACCTGTCATGACCTATAGACTTCACAA
AGAGCTGGTCTCTGCTGCCAAGTCTGACAACCTGGATTACCGCCTAGGAGCTATTCACTCCCTGGTATAT
AAGCTACCAGAAAAGAACCGAGAGATGCTGGAACTTCTGATAAGACACTTGGTCAATGTGTGTGAGCACA
GCAAAGAGAATCTTATGACCCCCTCCAACATGGGAGTAATCTTTGGGCCCACCCTGATGAGAGCTCAGGA
GGACACTGTGGCCGCCATGATGAACATCAAATTCCAGAACATAGTGGTGGAAATACTAATCGAGCACTTT
GGCAAGATCTATTTAGGTCCACCTGAGGAAAGCGCTGCACCGCCAGTGCCTCCGCCTCGGGTGACAGCAA
GAAGGCACAAACCAATCACGATTTCAAAGCGCTTGCTGCGAGAAAGGACGGTTTTCTATACTTCTTCCCT
GGATGAAAGCGAAGATGAAATCCAACATCAAACACCGAATGGTACTATCACCAGCAGCATAGAACCCCCC
AAGCCACCACAACACCCCAAACTACCTATTCAGAGGAGTGGGGAAACTGATCCTGGGAGGAAGTCCCCAA
GCAGGCCTATTTTGGATGGCAAGTTGGAGCCCTGCCCAGAGGTGGACGTGGGGAAGTTGGTGTCTAGGCT
GCAGGATGGAGGGACCAAGATCACCCCAAAGGCCACCAATGGACCCATGCCAGGCTCTGGGCCCACCAAG
ACCCCCTCTTTCCACATAAAGAGACCAGCTCCCCGGCCCCTGGCCCACCACAAGGAGGGGGATGCTGACA
GTTTCAGCAAAGTGCGGCCTCCAGGAGAAAAGCCAACCATCATCCGCCCCCCAGTGAGGCCCCCAGATCC
TCCCTGCCGGGCAGCTACTCCCCAAAAGCCAGAACCAAAGCCAGATATTGTGGCTGGCAATGCGGGGGAA
ATCACATCATCTGTGGTGGCTTCCAGGACCAGGTTTTTTGAAACAGCTTCCCGGAAAACAGGAAGTTCTC
AAGGCAGACTTCCTGGAGATGAAAGTTGA

Translation (802 aa):
MGHPPLEFSDCYLDSPDFRERLKCYEQELERTNKFIKDVIKDGNALISAMRNYSSAVQKFSQTLQSFQFD
FIGDTLTDDEINIAESFKEFAELLNEVENERMMMVHNASDLLIKPLENFRKEQIGFTKERKKKFEKDGER
FYSLLDRHLHLSSKKKESQLQEADLQVDKERHNFFESSLDYVYQIQEVQESKKFNIVEPVLAFLHSLFIS
NSLTVELTQDFLPYKQQLQLSLQNTRNHFSSTREEMEELKKRMKEAPQTCKLPGQPTIEGYLYTQEKWAL
GISWVKYYCQYEKETKTLTMTPMEQKPGAKQGPLDLTLKYCVRRKTESIDKRFCFDIETNERPGTITLQA
LSEANRRLWMEAMDGKEPIYHSPITKQQEMELNEVGFKFVRKCINIIETKGIKTEGLYRTVGSNIQVQKL
LNAFFDPKCPGDVDFHNSDWDIKTITSSLKFYLRNLSEPVMTYRLHKELVSAAKSDNLDYRLGAIHSLVY
KLPEKNREMLELLIRHLVNVCEHSKENLMTPSNMGVIFGPTLMRAQEDTVAAMMNIKFQNIVVEILIEHF
GKIYLGPPEESAAPPVPPPRVTARRHKPITISKRLLRERTVFYTSSLDESEDEIQHQTPNGTITSSIEPP
KPPQHPKLPIQRSGETDPGRKSPSRPILDGKLEPCPEVDVGKLVSRLQDGGTKITPKATNGPMPGSGPTK
TPSFHIKRPAPRPLAHHKEGDADSFSKVRPPGEKPTIIRPPVRPPDPPCRAATPQKPEPKPDIVAGNAGE
ITSSVVASRTRFFETASRKTGSSQGRLPGDES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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