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Report for CCDS14399.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14399.1 Public Homo sapiens X ARR3 24 110 108 CCDS HistoryNCBI Gene:407Re-query CCDS DB by CCDS ID:14399.1Re-query CCDS DB by GeneID:407See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14399.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307959.9 ENSP00000311538.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307959.9Link to Ensembl Protein Viewer:ENSP00000311538.8Re-query CCDS DB by Nucleotide ID:ENST00000307959Re-query CCDS DB by Protein ID:ENSP00000311538
Original member Current member NCBI NM_004312.3 NP_004303.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004312.3Link to Protein Sequence:NP_004303.2Re-query CCDS DB by Nucleotide ID:NM_004312Re-query CCDS DB by Protein ID:NP_004303Link to BLAST:NP_004303.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004303.2 388 P36575-1 388 100% 0 0

Chromosomal Locations for CCDS 14399.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70269386 70269393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70269662 70269692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70269843 70269903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70270100 70270144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70276082 70276281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70276433 70276492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70276669 70276736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70277394 70277529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70277716 70277800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70278066 70278138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70278504 70278641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70280195 70280278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70280559 70280582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70280766 70280818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70281099 70281108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70281676 70281766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGTCCAAGGTGTTTAAGAAGACCAGCTCCAATGGGAAGCTCTCCATCTACCTGGGGAAACGGGACTTCG
TGGACCATGTGGACACGGTGGAACCCATTGACGGTGTTGTCCTGGTTGATCCTGAGTACTTAAAATGTCG
AAAGTTGTTTGTCATGTTGACATGTGCCTTTCGCTATGGCCGTGATGACTTGGAAGTGATTGGTCTGACG
TTCCGAAAAGATCTGTATGTGCAGACCCTGCAAGTGGTCCCAGCTGAATCCAGCAGCCCTCAGGGGCCCC
TCACAGTCCTACAGGAGCGACTACTGCACAAGCTAGGGGACAATGCCTACCCCTTTACCCTGCAGATGGT
GACCAACCTGCCCTGTTCTGTGACACTGCAGCCAGGTCCTGAAGATGCAGGAAAGCCCTGTGGGATTGAC
TTTGAAGTGAAGAGTTTCTGTGCTGAAAACCCAGAGGAGACAGTCTCCAAGAGAGACTATGTGCGGCTGG
TTGTCCGGAAAGTACAATTTGCACCACCGGAGGCAGGCCCTGGCCCCTCAGCCCAGACCATCCGCCGCTT
CCTTCTGTCAGCTCAGCCCCTACAACTCCAGGCCTGGATGGACAGGGAGGTTCACTACCACGGAGAACCC
ATCTCTGTCAATGTTTCTATCAACAACTGCACCAACAAGGTCATCAAAAAAATCAAGATTTCAGTTGACC
AGATCACAGATGTTGTCCTGTATTCACTAGACAAGTACACCAAGACTGTGTTCATTCAGGAATTCACGGA
GACTGTAGCTGCTAATTCCAGCTTCTCCCAGAGCTTTGCAGTAACCCCAATCCTGGCTGCCAGCTGCCAG
AAACGGGGCCTGGCACTGGATGGCAAACTTAAGCATGAAGATACCAACCTGGCCTCTAGCACAATTATTA
GACCGGGAATGGACAAAGAGCTGCTGGGGATCCTGGTGTCCTACAAAGTCAGAGTCAACCTGATGGTGTC
CTGTGGTGGCATCCTAGGAGACCTGACAGCCAGCGATGTTGGTGTGGAGCTACCCTTGGTCCTGATCCAT
CCGAAGCCATCTCATGAGGCCGCTAGCTCTGAGGACATAGTCATCGAGGAGTTTACGCGGAAAGGCGAGG
AGGAGAGCCAGAAGGCTGTGGAGGCTGAGGGAGATGAGGGGAGCTGA

Translation (388 aa):
MSKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYLKCRKLFVMLTCAFRYGRDDLEVIGLT
FRKDLYVQTLQVVPAESSSPQGPLTVLQERLLHKLGDNAYPFTLQMVTNLPCSVTLQPGPEDAGKPCGID
FEVKSFCAENPEETVSKRDYVRLVVRKVQFAPPEAGPGPSAQTIRRFLLSAQPLQLQAWMDREVHYHGEP
ISVNVSINNCTNKVIKKIKISVDQITDVVLYSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILAASCQ
KRGLALDGKLKHEDTNLASSTIIRPGMDKELLGILVSYKVRVNLMVSCGGILGDLTASDVGVELPLVLIH
PKPSHEAASSEDIVIEEFTRKGEEESQKAVEAEGDEGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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