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Report for CCDS14550.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14550.2 Public Homo sapiens X TMEM164 24 110 108 CCDS HistoryNCBI Gene:84187Re-query CCDS DB by CCDS ID:14550.2Re-query CCDS DB by GeneID:84187See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14550.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372068.7 ENSP00000361138.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372068.7Link to Ensembl Protein Viewer:ENSP00000361138.2Re-query CCDS DB by Nucleotide ID:ENST00000372068Re-query CCDS DB by Protein ID:ENSP00000361138
Original member Current member EBI ENST00000372073.5 ENSP00000361143.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372073.5Link to Ensembl Protein Viewer:ENSP00000361143.1Re-query CCDS DB by Nucleotide ID:ENST00000372073Re-query CCDS DB by Protein ID:ENSP00000361143
Original member Current member NCBI NM_001353849.2 NP_001340778.1 Accepted alive Link to Nucleotide Sequence:NM_001353849.2Link to Protein Sequence:NP_001340778.1Re-query CCDS DB by Nucleotide ID:NM_001353849Re-query CCDS DB by Protein ID:NP_001340778Link to BLAST:NP_001340778.1
Original member Current member NCBI NM_032227.4 NP_115603.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032227.4Link to Protein Sequence:NP_115603.2Re-query CCDS DB by Nucleotide ID:NM_032227Re-query CCDS DB by Protein ID:NP_115603Link to BLAST:NP_115603.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001340778.1 297 Q5U3C3-1 297 100% 0 0
NP_115603.2 297 Q5U3C3-1 297 100% 0 0

Chromosomal Locations for CCDS 14550.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 110003775 110004164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110067347 110067396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110109080 110109146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110144798 110144876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110171420 110171520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110173245 110173451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGTCCCGGTATAGCTACCAGAGTCTCCTGGACTGGCTCTATGGGGGCGTGGACCCCAGTTTTGCAGGCA
ATGGGGGCCCCGACTGTGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGAAAGTGTGGTGGTCCTGAC
CCTGGCTCTGTTGGAGATCCTGGTGGCCCTGCGGCACATCCTGAGGCAGACGAAGGAGGACGGTAGGGGT
AGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGGCAAGGAGAGCCTGAGCAAGAATC
TGCTCTTAGTAGCCCTGTGCCTGACCTTCGGGGTGGAGGTGGGCTTTAAGTTCGCCACCAAGACCGTCAT
CTACCTGCTCAACCCCTGTCACCTGGTCACCATGATGCATATCTTTCTCCTGGCCTGCCCTCCATGTCGG
GGAGCTATCGTCGTCTTCAAGCTACAGATGCACATGTTGAATGGAGCTCTTCTGGCATTGCTGTTTCCTG
TGGTAAACACTCGGCTGCTCCCCTTTGAATTGGAGATTTACTACATTCAGCATGTTATGCTCTACGTGGT
ACCCATCTACCTGCTTTGGAAAGGAGGTGCTTACACTCCAGAGCCCCTCAGCAGTTTCCGGTGGGCTCTT
CTCTCAACTGGCCTCATGTTCTTTTATCACTTCAGCGTCTTGCAGATCCTCGGCCTGGTCACCGAAGTGA
ATTTGAACAACATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGCCCCTGGTATCGCATCTGGGCCTC
GGGACACCAGACTCTCATGACCATGACCCACGGGAAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCC
TTGTGTAAATATCTGCTGGATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGA

Translation (297 aa):
MSRYSYQSLLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILRQTKEDGRG
SPGSQPEQVTQRPEEGKESLSKNLLLVALCLTFGVEVGFKFATKTVIYLLNPCHLVTMMHIFLLACPPCR
GAIVVFKLQMHMLNGALLALLFPVVNTRLLPFELEIYYIQHVMLYVVPIYLLWKGGAYTPEPLSSFRWAL
LSTGLMFFYHFSVLQILGLVTEVNLNNMLCPAISDPFYGPWYRIWASGHQTLMTMTHGKLVILFSYMAGP
LCKYLLDLLRLPAKKID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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