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Report for CCDS14676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14676.1 Public Homo sapiens X MAGEC3 24 110 108 CCDS HistoryNCBI Gene:139081Re-query CCDS DB by CCDS ID:14676.1Re-query CCDS DB by GeneID:139081See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14676.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298296.1 ENSP00000298296.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298296.1Link to Ensembl Protein Viewer:ENSP00000298296.1Re-query CCDS DB by Nucleotide ID:ENST00000298296Re-query CCDS DB by Protein ID:ENSP00000298296
Original member Current member NCBI NM_138702.1 NP_619647.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138702.1Link to Protein Sequence:NP_619647.1Re-query CCDS DB by Nucleotide ID:NM_138702Re-query CCDS DB by Protein ID:NP_619647Link to BLAST:NP_619647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619647.1 643 Q8TD91-1 643 100% 0 0

Chromosomal Locations for CCDS 14676.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 141838316 141838438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141865471 141865605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141879175 141879431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141881403 141881796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141895269 141895407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141895485 141895559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141896882 141897486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141897629 141897832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1932 nt):
ATGCTGCTGCCCTGCCACTGGGTGTTGGATGCCACCTTCAGTGATGGCAGTCTAGGCCAGTGGGTGAAAA
ACACATGTGCCACATATGCCTTATCCCCAGTGGTGCTCCCACCTCAGCCCCAGCCCCGGAAAAAGGCCAC
AGATAAGGACTATTCTGCCTTTCATCTTGGGCATCTGAGGGAGGTGAGGCTTTTTCTGAGGGGTGGAACT
TCAGATCAGCGAATGGATAGTCTTGTCCTCTGCCCCACATACTTCAAGCTCTGGAGGACCCTATCAGGGT
CCCCAGGTTTACAACTTTCTGACTTGCATTTTGGGAGTCAGCCGGAGGGGAAGTTTTCTCTGAGGAGGGC
AGTTTCAGTTAAGCAGAGGGAGGAACCCCAGGACTGGCCACTCAACGAGAAGAGAACTCTGTGGAAGGAC
AGTGACCTTCCAACATGGAGGAGAGGCACAGGCTACACCCTTTCCCTTCCTGCCGTCAGCCCTGGAAAAA
GGTTGTGGGGGGAGAAAGCGGGGAGCTTGCCAGAGAGCGAGCCCTTGTTCACTTATACACTGGATGAAAA
GGTGGACAAGTTGGTGCAGTTTCTTCTCCTCAAATATCAAGCAAAAGAGCCTCTCACAAGAGCAGAGATG
CAGATGAATGTCATCAACACATACACGGGCTACTTTCCTATGATCTTCAGGAAAGCCCGTGAGTTCATAG
AGATTCTTTTTGGCATTTCCCTGACAGAAGTGGACCCCGACCATTTCTATGTCTTTGTAAACACATTAGA
CCTCACCTGTGAGGGGAGTCTGAGTGATGAGCAGGGCATGCCCCAGAACCGCCTCCTGATTCTTATTCTG
AGTGTGATCTTCATAAAGGGCAACTGTGCATCTGAGGAGGTCATCTGGGAAGTGCTGAATGCAATAGGGC
CCTGGTCAGCCTTGGCAGGGTTCGCGGATGTGCTTTCCCGACTTGCACTGTGGGAGTCTGAAGGACCTGA
AGCATTTTGCGAGGAGTCTGGACTCAGGTCAGCAGAGGGAAGCGTCTTAGACCTGGCCAATCCTCAAGGA
CTTGCAGGCCACAGACAGGAAGATGGCCGCCGAGGGCTGACCGAGGCGTCCCCACAACAGAAGAAGGGAG
GAGAAGATGAGGATATGCCTGCTGCTGGGATGCCACCTCTTCCCCAGAGTCCTCCTGAGATTCCTCCCCA
GGGTCCTCCCAAGATCTCTCCCCAGGGTCCTCCGCAGAGTCCTCCCCAGAGTCCTCTAGACTCCTGCTCA
TCCCCTCTTTTGTGGACCCGATTGGATGAGGAGTCCAGCAGTGAAGAGGAGGATACAGCTACTTGGCATG
CCTTGCCAGAAAGTGAATCCTTGCCCAGGTATGCCCTGGATGAAAAGGTGGCTGAGTTGGTGCAGTTTCT
TCTCCTCAAATATCAAACAAAAGAGCCTGTCACAAAGGCAGAGATGCTGACGACTGTCATCAAGAAGTAT
AAGGACTATTTTCCCATGATCTTCGGGAAAGCCCATGAGTTCATAGAGCTAATTTTTGGCATTGCCCTGA
CTGATATGGACCCCGACAACCACTCCTATTTCTTTGAAGACACATTAGACCTCACCTATGAGGGAAGCCT
GATTGATGACCAGGGCATGCCCAAGAACTGTCTCCTGATTCTTATTCTCAGTATGATCTTCATAAAGGGC
AGCTGTGTCCCCGAGGAGGTCATCTGGGAAGTGTTGAGTGCAATAGGGCCCATTCAGAGGCCAGCAAGAG
AAGTCTTAGAGTTTTTATCCAAGCTATCCAGTATCATCCCTAGTGCCTTTCCATCCTGGTACATGGATGC
TTTGAAAGATATGGAAGACAGAGCCCAGGCCATAATTGACACCACAGATGATGCTACTGCCATGGCCAGT
GCAAGCCCCAGTGTCATGTCCACCAACTTCTGTCCTGAGTGA

Translation (643 aa):
MLLPCHWVLDATFSDGSLGQWVKNTCATYALSPVVLPPQPQPRKKATDKDYSAFHLGHLREVRLFLRGGT
SDQRMDSLVLCPTYFKLWRTLSGSPGLQLSDLHFGSQPEGKFSLRRAVSVKQREEPQDWPLNEKRTLWKD
SDLPTWRRGTGYTLSLPAVSPGKRLWGEKAGSLPESEPLFTYTLDEKVDKLVQFLLLKYQAKEPLTRAEM
QMNVINTYTGYFPMIFRKAREFIEILFGISLTEVDPDHFYVFVNTLDLTCEGSLSDEQGMPQNRLLILIL
SVIFIKGNCASEEVIWEVLNAIGPWSALAGFADVLSRLALWESEGPEAFCEESGLRSAEGSVLDLANPQG
LAGHRQEDGRRGLTEASPQQKKGGEDEDMPAAGMPPLPQSPPEIPPQGPPKISPQGPPQSPPQSPLDSCS
SPLLWTRLDEESSSEEEDTATWHALPESESLPRYALDEKVAELVQFLLLKYQTKEPVTKAEMLTTVIKKY
KDYFPMIFGKAHEFIELIFGIALTDMDPDNHSYFFEDTLDLTYEGSLIDDQGMPKNCLLILILSMIFIKG
SCVPEEVIWEVLSAIGPIQRPAREVLEFLSKLSSIIPSAFPSWYMDALKDMEDRAQAIIDTTDDATAMAS
ASPSVMSTNFCPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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